Non-Coding RNA Search

Ss1.1-rret23_l24.5

Sequence:


               
               TTTATATATGATTCTAAAATATACCAGTTAAATAATTTTTTTAAAATTTGCCTGATATTG
AAAGACAACACACTTTTCCAAAATAAGGTAGTTTTAGGATATTGGCTTTTTCTTCTGTTC
TTTCAGGTTGATCTTCTGTTAAAAATGATTAACCTTTATGAGAAGGAAAATTGAGTTGCT
CTAACTTTTACACTTCCATAGTTTAACATTATGTTGAGGTAACAGTCAGTGGCCCAAAGG
CACCTGCTTTTTTTGTAGCATTTGTACCAGCTGCTGTCTTCAGATTTTCTCACACATTTG
TGTTTTATAATGCTCGTGATTGTGTGCCTTGTTCTCTGAAAGGGAGGAAGCAATGCCTTA
TCCAAAGCAGATTTTTCTTATTAAGTTAATAGAGTTCTATAAATTGTCATAAAGGATCAA
GCTCTTATAGTTTTTGTTGTTAACCAGTTGGTTGTAGTCTATTATATTGTACAATTTGTT
ACTCTTACAATCTGTTTTTGTCTTTCAAGAGCTATTACTGTATCAGTTTGGTTGGTTTAA
TAGTAAATATTACATAGTGGGGATAAATTTGATTAAGGTAGGTCTTTTTTAAAAGCATAT
GATTTTAGAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTATATATGATTCTAAAATATACCAGTTAAATAATTTTTTTAAAATTTGCCTGATATTG
AAAGACAACACACTTTTCCAAAATAAGGTAGTTTTAGGATATTGGCTTTTTCTTCTGTTC
TTTCAGGTTGATCTTCTGTTAAAAATGATTAACCTTTATGAGAAGGAAAATTGAGTTGCT
CTAACTTTTACACTTCCATAGTTTAACATTATGTTGAGGTAACAGTCAGTGGCCCAAAGG
CACCTGCTTTTTTTGTAGCATTTGTACCAGCTGCTGTCTTCAGATTTTCTCACACATTTG
TGTTTTATAATGCTCGTGATTGTGTGCCTTGTTCTCTGAAAGGGAGGAAGCAATGCCTTA
TCCAAAGCAGATTTTTCTTATTAAGTTAATAGAGTTCTATAAATTGTCATAAAGGATCAA
GCTCTTATAGTTTTTGTTGTTAACCAGTTGGTTGTAGTCTATTATATTGTACAATTTGTT
ACTCTTACAATCTGTTTTTGTCTTTCAAGAGCTATTACTGTATCAGTTTGGTTGGTTTAA
TAGTAAATATTACATAGTGGGGATAAATTTGATTAAGGTAGGTCTTTTTTAAAAGCATAT
GATTTTAGAAAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-612, gnl|bosTau2|chr20 (16981537-16982157)
               

               
               1-612, gnl|Hg17|chr5 (43481179-43480569)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-612, gnl|bosTau2|chr20 (16981537-16982157)
               

               
               1-612, gnl|Hg17|chr5 (43481179-43480569)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ret (0.257467)
               

               
               fco (0.157208)
               

               
               ova (0.129132)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               fco (0.157208)
               

               
               ova (0.129132)
               

               
               tra (0.123092)

	1-612, gnl\|bosTau2\|chr20 (16981537-16982157)
	1-612, gnl\|Hg17\|chr5 (43481179-43480569)