Non-Coding RNA Search

Ss1.1-rret24_f24.5

Sequence:


               
               GGGAAGTGGTCATTACCAGAAGCAGCTATTATCTCACTAAGGCTTGGGGAACAGAGGATA
AGCTTGCAATTA------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAATGACACATGTATCCCAATGTACATGGCAG
CACTATTTATAATAGCCAAGACATGGAAACAATGTAAATGTCCACCAACAGAGGAATGGA
TAAAGAAGATGTTGTACATACATGCAATGGAATATTACTCAGCTATAAAAAGAACCAAAT
AATGCCATTTGCAGCAATAATAATGCCATTTGATGGACTTAGAGATTATTGTACTAAGTC
AGACAAAGACAAATACAGATACTAATTACATGTGGACTCTAATAAAATGATACAAAAGAA
CTTATTTATAAAACAGAAACAAAATCACAGATGTTGAAATCAAACCTATAGTTACCATAG
GGAAACCTGTAGCAGAGAAGAATAAATTAGGAGGATAGGAATAATATATACACTGTATTG
TATAAAATAGACTACTAACAAGGACTACTTTATAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAGTGGTCATTACCAGAAGCAGCTATTATCTCACTAAGGCTTGGGGAACAGAGGATA
AGCTTGCAATTA------------------------------------------------
------------------------------------------------------------
------------------------AAAAAAATGACACATGTATCCCAATGTACATGGCAG
CACTATTTATAATAGCCAAGACATGGAAACAATGTAAATGTCCACCAACAGAGGAATGGA
TAAAGAAGATGTTGTACATACATGCAATGGAATATTACTCAGCTATAAAAAGAACCAAAT
AATGCCATTTGCAGCAATAATAATGCCATTTGATGGACTTAGAGATTATTGTACTAAGTC
AGACAAAGACAAATACAGATACTAATTACATGTGGACTCTAATAAAATGATACAAAAGAA
CTTATTTATAAAACAGAAACAAAATCACAGATGTTGAAATCAAACCTATAGTTACCATAG
GGAAACCTGTAGCAGAGAAGAATAAATTAGGAGGATAGGAATAATATATACACTGTATTG
TATAAAATAGACTACTAACAAGGACTACTTTATAGC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               43-412, gnl|bosTau2|chr1 (92370761-92370388)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               43-412, gnl|bosTau2|chr1 (92370761-92370388)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               ret (0.128733)