Non-Coding RNA Search

Ss1.1-rret24_p14.5

Sequence:


               
               ATGGTTTTGCTGCAACAGACAAAGGAAATTCCTGTCCTTTTTAATGGACTCCAGCTGCCT
ACCAAGGCTCACTGCTCACTTCAGGCTGTGCCCAAGTTATTTATAGGAGATATCTCAGTG
TAACCTAGGGAAGTGCAGGTCATTTGAAAATAAAGACACAGAAAACCCAAATGAGAAACT
CCATTTCTAGAATTAGTTTTCCTGAAAGTCAGGCCTGTCTTTGAGGACAAGCTTTTGGCT
GTATTATTTTTGTGCACCGGAGAAAAGTTATTGGTAGGTTTATAGATATTATTTTTATAA
TAGAATGTTAAGCTCCCCCCAAAACATCAAAAATTGTCTCCTAAAATGGTTTCTAAAGCT
TGTTTAAAAAACAGAAGGATTGTAAATAGCAAATAGGGCCTTTTCTCCTTTCTCCTCTGC
CATGGTTTAATGGGATAGATGAACCAATGTTTATATTTTTAAGCCTGTAAATATTTTATT
TTGGGTATTTTGTATATTTGTTGATACAGCTCCATGGTGCGCATATGTACGTACCATCGT
GCATGTTGCTGGTTTTGATTGTCACTCTTTTAATGACGGTGAGAAGCTTGGACTAATAGC
ACTTTCCTTGTTTCGTTCAAACATCTTCAAATGAAAATACAGCACTGCCATTTTAAACGT
TGCGTTTCATTCAGTCAATAAATTTTGTTGCTCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGTTTTGCTGCAACAGACAAAGGAAATTCCTGTCCTTTTTAATGGACTCCAGCTGCCT
ACCAAGGCTCACTGCTCACTTCAGGCTGTGCCCAAGTTATTTATAGGAGATATCTCAGTG
TAACCTAGGGAAGTGCAGGTCATTTGAAAATAAAGACACAGAAAACCCAAATGAGAAACT
CCATTTCTAGAATTAGTTTTCCTGAAAGTCAGGCCTGTCTTTGAGGACAAGCTTTTGGCT
GTATTATTTTTGTGCACCGGAGAAAAGTTATTGGTAGGTTTATAGATATTATTTTTATAA
TAGAATGTTAAGCTCCCCCCAAAACATCAAAAATTGTCTCCTAAAATGGTTTCTAAAGCT
TGTTTAAAAAACAGAAGGATTGTAAATAGCAAATAGGGCCTTTTCTCCTTTCTCCTCTGC
CATGGTTTAATGGGATAGATGAACCAATGTTTATATTTTTAAGCCTGTAAATATTTTATT
TTGGGTATTTTGTATATTTGTTGATACAGCTCCATGGTGCGCATATGTACGTACCATCGT
GCATGTTGCTGGTTTTGATTGTCACTCTTTTAATGACGGTGAGAAGCTTGGACTAATAGC
ACTTTCCTTGTTTCGTTCAAACATCTTCAAATGAAAATACAGCACTGCCATTTTAAACGT
TGCGTTTCATTCAGTCAATAAATTTTGTTGCTCCTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-696, gnl|bosTau2|chr12 (18746541-18747222)
               

               
               1-696, gnl|Hg17|chr13 (24634521-24633832)
               

               
               1-696, gnl|Mm7|chr14 (55254909-55255586)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-696, gnl|bosTau2|chr12 (18746541-18747222)
               

               
               1-696, gnl|Hg17|chr13 (24634521-24633832)
               

               
               1-696, gnl|Mm7|chr14 (55254909-55255586)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               fce (0.271592)
               

               
               ret (0.257467)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               ret (0.257467)

	1-696, gnl\|bosTau2\|chr12 (18746541-18747222)
	1-696, gnl\|Hg17\|chr13 (24634521-24633832)
	1-696, gnl\|Mm7\|chr14 (55254909-55255586)