Non-Coding RNA Search

Ss1.1-rret28_f22.5

Sequence:


               
               GATAGTTTGTTTTACAGAAATTTTTGTTGTAGTAGAGTTTTGCTTAGAAGATGAAGAAAT
CCACTCATGCCTTTCCTTGCCCTACAAATATATTTTCATATCTGAAATTAAATCTTTGTG
TTATAATGGTGCAATTTTTTATATTGGCCACTATCAAAGTCATGTGCAAGAAATTACTGC
ATGTAAAATCCTAATATATGAAGTTCTGGATTATCCACACTTAATGGAAGCACATTCATT
TTTATTTGGCACTGAAGTGAATTTACTGGTTGATACACTTTCTGTTTGTTTGTATTTACA
CTGACAAACTTACATTTCTACTCAGTTTTCCTAAGATTAAAATTAAAAGGACCATGGCCT
GAAGTATTTTGATGTTTTAGATAGCGGTTTAGAATTATCTCAAACTTTAAAACACTATTC
ACATATCTGGTAGTATAGAGAACCCACTTTACAGTTGCAATTGACCTGTTTGAATTATGA
TGATAGAAATGTCTCCATCTGAAAAAAAGGTAGGAAAATAATCATTTTAAATATTGAAGT
GTGCAATATGTTGAAGTTATGGTTTTATATATTGAAACATTTACATTCAGAAATTAAAGA
TAACAAAAATGTTGAAGATAGGAGCTAAAACGAATCCATTCCTTATTGAATAGAAGTCTA
TAATTATCGTAGATCAGTTTTTCTTGCATAAATTGACATAAAACATGAGAAAAATATAAA
GAATGAAAAAATTAGCATAAAAGTAACAATGGAATAATTAATCCAAATTATGAAGTCCTA
ATGTTATATGAATGCATCAGTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAGTTTGTTTTACAGAAATTTTTGTTGTAGTAGAGTTTTGCTTAGAAGATGAAGAAAT
CCACTCATGCCTTTCCTTGCCCTACAAATATATTTTCATATCTGAAATTAAATCTTTGTG
TTATAATGGTGCAATTTTTTATATTGGCCACTATCAAAGTCATGTGCAAGAAATTACTGC
ATGTAAAATCCTAATATATGAAGTTCTGGATTATCCACACTTAATGGAAGCACATTCATT
TTTATTTGGCACTGAAGTGAATTTACTGGTTGATACACTTTCTGTTTGTTTGTATTTACA
CTGACAAACTTACATTTCTACTCAGTTTTCCTAAGATTAAAATTAAAAGGACCATGGCCT
GAAGTATTTTGATGTTTTAGATAGCGGTTTAGAATTATCTCAAACTTTAAAACACTATTC
ACATATCTGGTAGTATAGAGAACCCACTTTACAGTTGCAATTGACCTGTTTGAATTATGA
TGATAGAAATGTCTCCATCTGAAAAAAAGGTAGGAAAATAATCATTTTAAATATTGAAGT
GTGCAATATGTTGAAGTTATGGTTTTATATATTGAAACATTTACATTCAGAAATTAAAGA
TAACAAAAATGTTGAAGATAGGAGCTAAAACGAATCCATTCCTTATTGAATAGAAGTCTA
TAATTATCGTAGATCAGTTTTTCTTGCATAAATTGACATAAAACATGAGAAAAATATAAA
GAATGAAAAAATTAGCATAAAAGTAACAATGGAATAATTAATCCAAATTATGAAGTCCTA
ATGTTATATGAATGCATCAGTGAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               5-618, gnl|bosTau2|chr6 (7011188-7010552)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-618, gnl|bosTau2|chr6 (7011188-7010552)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               ret (0.514933)
               

               
               fco (0.314416)
               

               
               spl (0.143184)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.514933)
               

               
               fco (0.314416)
               

               
               spl (0.143184)