Non-Coding RNA Search

Ss1.1-rret28_f4.5

Sequence:


               
               ACAATGCATCTGACGTTCACCTTCTCCAAGACAACTATGGATGTGAATCTTGAGTGAATC
ACTTTGGTGACAGGTACCCATTTAACTCACGATGACAAATGCAGGTGCTTTTTCTTTATT
CCTTTCTATTTTGTAAAGACAAAGGACACTAGACCATTAAACACCTTGAGTCCGAGGACA
GTTAATTGCCTCCACAATCCCCAGAGCCTGGACAATGCCTGGTGCGTAGAAAGCTCTCAG
TGCTTATTAAATTAAATCTCACAACTCCCTTCTAAGGATACTGCCATGAGGTAAAGCTCT
AAACCTCTACCACTTCTCCTGCGAGCAGCAGAGGTACCTAGCTGCTCATGAACCTGGAAC
CATTGCCTGAGCTTAAGTTCTTTATCTTCATCTGCACCAATCCTGGGAGAGCTGGCAATC
TACCCTTAACATTTCAGTGTTAAAACCTGGCTGATTTCCAATCGCACTTTGTCCAAACTG
TAGAAATGTTATGGATTCAGGAGTACATGTGCTTGATTTATCAAACAAGCTGGAAAACTA
AAATGCTAGATTTTTTGTTGTAAATTGATCACTGTAATTTTCACCTTATATGTTATTTGT
ATTTTGTATATAATACACACACACACACATATACACACACGCAAACATTTTAATTTCAAT
GGCTTTTAACAGGTTGACATTACTTCTCCATGCAGGTCGGTACTTTTTTCCCACTTGTAA
CTACAATTCAATAAAACTTAGTCCTGTCTGCTCATCTTGCTCCACGTTGAATGATTTAGG
TGAGTCAGCACCCATGGCTTAAGAACAGGAGCTATACCTCACAAAAACATCTCTAGCAAA
CTATCATCTTCCTTCATCTCCAGAAAACTATCAAAAGGATAAAGGCAGCTGATGGCAGAG
GAACAAGGGGGGAGGAGAGAGGTCAGCTCTCCCCTGTGTTCCTGCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAATGCATCTGACGTTCACCTTCTCCAAGACAACTATGGATGTGAATCTTGAGTGAATC
ACTTTGGTGACAGGTACCCATTTAACTCACGATGACAAATGCAGGTGCTTTTTCTTTATT
CCTTTCTATTTTGTAAAGACAAAGGACACTAGACCATTAAACACCTTGAGTCCGAGGACA
GTTAATTGCCTCCACAATCCCCAGAGCCTGGACAATGCCTGGTGCGTAGAAAGCTCTCAG
TGCTTATTAAATTAAATCTCACAACTCCCTTCTAAGGATACTGCCATGAGGTAAAGCTCT
AAACCTCTACCACTTCTCCTGCGAGCAGCAGAGGTACCTAGCTGCTCATGAACCTGGAAC
CATTGCCTGAGCTTAAGTTCTTTATCTTCATCTGCACCAATCCTGGGAGAGCTGGCAATC
TACCCTTAACATTTCAGTGTTAAAACCTGGCTGATTTCCAATCGCACTTTGTCCAAACTG
TAGAAATGTTATGGATTCAGGAGTACATGTGCTTGATTTATCAAACAAGCTGGAAAACTA
AAATGCTAGATTTTTTGTTGTAAATTGATCACTGTAATTTTCACCTTATATGTTATTTGT
ATTTTGTATATAATACACACACACACACATATACACACACGCAAACATTTTAATTTCAAT
GGCTTTTAACAGGTTGACATTACTTCTCCATGCAGGTCGGTACTTTTTTCCCACTTGTAA
CTACAATTCAATAAAACTTAGTCCTGTCTGCTCATCTTGCTCCACGTTGAATGATTTAGG
TGAGTCAGCACCCATGGCTTAAGAACAGGAGCTATACCTCACAAAAACATCTCTAGCAAA
CTATCATCTTCCTTCATCTCCAGAAAACTATCAAAAGGATAAAGGCAGCTGATGGCAGAG
GAACAAGGGGGGAGGAGAGAGGTCAGCTCTCCCCTGTGTTCCTGCCTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-947, gnl|bosTau2|chr11 (8158978-8159901)
               

               
               1-947, gnl|Hg17|chr2 (74356060-74354840)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-947, gnl|bosTau2|chr11 (8158978-8159901)
               

               
               1-947, gnl|Hg17|chr2 (74356060-74354840)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ret (0.7724)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.7724)

	1-947, gnl\|bosTau2\|chr11 (8158978-8159901)
	1-947, gnl\|Hg17\|chr2 (74356060-74354840)