Non-Coding RNA Search

Ss1.1-rret28_i7.5

Sequence:


               
               TACTTCTCAACTTCTACCATTTATCTCAGCTCTGTTTCTTATAGTGAGGAATCTAGAACA
TTGCCTGATAATAACGTTTAAAATAAGACATCTTATACAATAAAATTTGGAAGTATTGGA
AAGGAAAGTACTTAAATTTGAAGGCAACTCATACCTCTTAATTCTTGGGTATTAGATTGG
GGCAGCTGGTTTCAGAAGATGCCTTCATAATTATAATAGAGGCAATGATTCCTCAATGAT
CATGATAAGAATAGTAATTCAACATGTGGAAAATGCAAAAGAACCGTCTTTTAAAATAAA
GCTAATAAAAGATGATTAATATCTCAGCTTCCCCATGTTCCATTATATACTTTGAATCTT
ACACGTCCTCATACTTTGTTCATAATCTGCATTTCATGTGTTTTCTAGGTCCTGATGTTC
GACGAGACAAACCTGTAACAGGGGACCACATAGAAGTATTTGCTAACAAATTGGGTGAAC
AATGGAAGATTCTGGCTCCCTACCTGGAAATGAAAGACTCAGAAATTAGACAGATTGAGT
GTGACAGCGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTTCTCAACTTCTACCATTTATCTCAGCTCTGTTTCTTATAGTGAGGAATCTAGAACA
TTGCCTGATAATAACGTTTAAAATAAGACATCTTATACAATAAAATTTGGAAGTATTGGA
AAGGAAAGTACTTAAATTTGAAGGCAACTCATACCTCTTAATTCTTGGGTATTAGATTGG
GGCAGCTGGTTTCAGAAGATGCCTTCATAATTATAATAGAGGCAATGATTCCTCAATGAT
CATGATAAGAATAGTAATTCAACATGTGGAAAATGCAAAAGAACCGTCTTTTAAAATAAA
GCTAATAAAAGATGATTAATATCTCAGCTTCCCCATGTTCCATTATATACTTTGAATCTT
ACACGTCCTCATACTTTGTTCATAATCTGCATTTCATGTGTTTTCTAGGTCCTGATGTTC
GACGAGACAAACCTGTAACAGGGGACCACATAGAAGTATTTGCTAACAAATTGGGTGAAC
AATGGAAGATTCTGGCTCCCTACCTGGAAATGAAAGACTCAGAAATTAGACAGATTGAGT
GTGACAGCGAAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-552, gnl|bosTau2|chr24 (25583937-25583394)
               

               
               1-552, gnl|Hg17|chr18 (205344-204778)
               

               
               1-552, gnl|Mm7|chr18 (10199532-10200014)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-552, gnl|bosTau2|chr24 (25583937-25583394)
               

               
               1-552, gnl|Hg17|chr18 (205344-204778)
               

               
               1-552, gnl|Mm7|chr18 (10199532-10200014)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               ret (0.128733)

	1-552, gnl\|bosTau2\|chr24 (25583937-25583394)
	1-552, gnl\|Hg17\|chr18 (205344-204778)
	1-552, gnl\|Mm7\|chr18 (10199532-10200014)