Ss1.1-rret30_d7.5
|
TTTATTTTGCATTTTAGACTTGCCTTCCATTTACTGAAGTAGAATCTATCACTTTATGCT
TCAGTTTTGACCTGTGGGATTTATTTTCTTCCCCTCAAAATTTAAACAGAATCAGTGATA
GTATCAGACCAAGACTGGTGCTGTTACTAAACCTCATAGACCAATACATAAACTATAGGG
GAAAAAAATTCATATATATCCTAAGAGAATTTAGGTACTGATTAAAAATTGTGCTATTTC
TCTATTAATACAGCCCTTTGGAGGTATCTTTTCTAATGAGACAAAAAATGCTTTTCTTAA
AAGCTATAGAACTGTATATAAATTTTGTTCATTTAGAACTCAGTATTCTGGAGAAAACCA
ATGGTCAGTAGTTTTGAGTTATCTAAGACTACATTTTCAAAATGAATTTAAATATATACT
TGGTTTTTTATCTTAGTAAAGACAGTTTCAAATTTGATCCATTGTGTTAATAGGTTTCTA
GATTACTGGAGATGAGGAAAATATATACTGAGTTTTGAAATTTTTTGATAAGCCTCTCAT
ACCTCTTATGCACTTTTTAAAATAAAAAAAATCCTAAAAAGAATTTTCTAAATAGAAACT
TAATGCATAGTATAAAACACTTGGCTTCTGAATTTGATACATTATATTAATAAGTAATTA
AGAAATTAACTTCAATTAAAAGTAAACATTTGAGTTATCAGAAAGCCAGTTTATTAAACA
TTTTATACTTGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTATTTTGCATTTTAGACTTGCCTTCCATTTACTGAAGTAGAATCTATCACTTTATGCT
TCAGTTTTGACCTGTGGGATTTATTTTCTTCCCCTCAAAATTTAAACAGAATCAGTGATA
GTATCAGACCAAGACTGGTGCTGTTACTAAACCTCATAGACCAATACATAAACTATAGGG
GAAAAAAATTCATATATATCCTAAGAGAATTTAGGTACTGATTAAAAATTGTGCTATTTC
TCTATTAATACAGCCCTTTGGAGGTATCTTTTCTAATGAGACAAAAAATGCTTTTCTTAA
AAGCTATAGAACTGTATATAAATTTTGTTCATTTAGAACTCAGTATTCTGGAGAAAACCA
ATGGTCAGTAGTTTTGAGTTATCTAAGACTACATTTTCAAAATGAATTTAAATATATACT
TGGTTTTTTATCTTAGTAAAGACAGTTTCAAATTTGATCCATTGTGTTAATAGGTTTCTA
GATTACTGGAGATGAGGAAAATATATACTGAGTTTTGAAATTTTTTGATAAGCCTCTCAT
ACCTCTTATGCACTTTTTAAAATAAAAAAAATCCTAAAAAGAATTTTCTAAATAGAAACT
TAATGCATAGTATAAAACACTTGGCTTCTGAATTTGATACATTATATTAATAAGTAATTA
AGAAATTAACTTCAATTAAAAGTAAACATTTGAGTTATCAGAAAGCCAGTTTATTAAACA
TTTTATACTTGA
|
|
5-176, gnl|bosTau2|chr1 (63235353-63235183) |
|
5-176, gnl|Hg17|chr3 (170987449-170987622) |
|
5-176, gnl|Mm7|chr3 (30429065-30429212) |
| |
|
186-732, gnl|bosTau2|chr1 (63234998-63234452) |
|
186-732, gnl|canFam2|chr34 (37398379-37398869) |
|
186-732, gnl|dasNov1|scaffold_11987 (49495-49992) |
|
186-732, gnl|echTel1|scaffold_285402 (3242-3701) |
|
186-732, gnl|hg17|chr3 (170987625-170988130) |
|
186-732, gnl|Hg17|chr3 (170987645-170988196) |
|
186-732, gnl|mm7|chr3 (30429214-30429699) |
|
186-732, gnl|Mm7|chr3 (30429224-30429811) |
|
186-732, gnl|monDom2|scaffold_52 (2248127-2247611) |
|
186-732, gnl|panTro1|chr2 (174476129-174476634) |
|
186-732, gnl|rheMac2|chr2 (117230566-117230056) |
|
186-732, gnl|rn3|chr2 (117144682-117144158) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-176, gnl|bosTau2|chr1 (63235353-63235183) |
|
5-176, gnl|Hg17|chr3 (170987449-170987622) |
|
5-176, gnl|Mm7|chr3 (30429065-30429212) |
| |
|
186-732, gnl|bosTau2|chr1 (63234998-63234452) |
|
186-732, gnl|canFam2|chr34 (37398379-37398869) |
|
186-732, gnl|dasNov1|scaffold_11987 (49495-49992) |
|
186-732, gnl|echTel1|scaffold_285402 (3242-3701) |
|
186-732, gnl|hg17|chr3 (170987625-170988130) |
|
186-732, gnl|Hg17|chr3 (170987645-170988196) |
|
186-732, gnl|mm7|chr3 (30429214-30429699) |
|
186-732, gnl|Mm7|chr3 (30429224-30429811) |
|
186-732, gnl|monDom2|scaffold_52 (2248127-2247611) |
|
186-732, gnl|panTro1|chr2 (174476129-174476634) |
|
186-732, gnl|rheMac2|chr2 (117230566-117230056) |
|
186-732, gnl|rn3|chr2 (117144682-117144158) |
|
tra (0.246184) |
|
ece (0.229305) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
spl (0.143184) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ret (0.128733) |
|
ebs (0.118301) |
|
tra (0.246184) |
|
ece (0.229305) |
|
mga (0.160205) |
|
tbr (0.154178) |
|
lin (0.145603) |
|
spl (0.143184) |
|
nmm (0.132802) |
|
kid (0.129735) |
|
ret (0.128733) |
|
ebs (0.118301) |
