Non-Coding RNA Search

Ss1.1-rret34_n1.5

Sequence:


               
               TTTTTGTGGATCACTACAGTTGGGTGAAGTGTTCTGCTATAGAAAGAAGGGAAAGAGGTT
ATTCTGACTTCGAGAGAAGGGAACAAGGAACCTACTCACCTAAGAACAGTCTGAAGCTTA
TCCACAAGGTGCTTGGACATTCAGAACATCAGTTTACATCTTTGAGTAGTCCTGCTTGTG
CTTGGGGTGTTTAAAGTAATATTTATTGACCTTTCCTGATTACCAAAGTAGTATATGCTC
ATGATAAAAAAATTCAAATGTTACATAAAAGTAAATAATGAACGTCTCTGCCAACCACAT
ACCCACACATACAAAAACGCTTTCCTCCCTTGGAAGTAAACACAAATTTGGCATGCATCT
TTCAGGTTTTTTTCCCTGTGCATTTACTAACATTTTTTAATTACAAATTTTTAATATAAA
ATATACATTTTAATAAAAGTATCTTTATTTTACAGAACTATAATCAAATTATACATTATT
TTTCTGCAACTTGTGCTTTCACTTGGGAAAATTTTAGTGTTAACATGTACAGATAAACTT
CACCCTTTTCATGGCTGTGTAGTGTTCCATTGTGTGGTGTACCACAGTTGAAGCAATCCT
TTATGGATAGACTCTTACCAGTACTATTACCAGTATTGCTGCAATGAACAAATTTGTGTG
TACATTTTTATATAGTCTGTATATTTGTAAATCTTAAAAAAATAATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTGTGGATCACTACAGTTGGGTGAAGTGTTCTGCTATAGAAAGAAGGGAAAGAGGTT
ATTCTGACTTCGAGAGAAGGGAACAAGGAACCTACTCACCTAAGAACAGTCTGAAGCTTA
TCCACAAGGTGCTTGGACATTCAGAACATCAGTTTACATCTTTGAGTAGTCCTGCTTGTG
CTTGGGGTGTTTAAAGTAATATTTATTGACCTTTCCTGATTACCAAAGTAGTATATGCTC
ATGATAAAAAAATTCAAATGTTACATAAAAGTAAATAATGAACGTCTCTGCCAACCACAT
ACCCACACATACAAAAACGCTTTCCTCCCTTGGAAGTAAACACAAATTTGGCATGCATCT
TTCAGGTTTTTTTCCCTGTGCATTTACTAACATTTTTTAATTACAAATTTTTAATATAAA
ATATACATTTTAATAAAAGTATCTTTATTTTACAGAACTATAATCAAATTATACATTATT
TTTCTGCAACTTGTGCTTTCACTTGGGAAAATTTTAGTGTTAACATGTACAGATAAACTT
CACCCTTTTCATGGCTGTGTAGTGTTCCATTGTGTGGTGTACCACAGTTGAAGCAATCCT
TTATGGATAGACTCTTACCAGTACTATTACCAGTATTGCTGCAATGAACAAATTTGTGTG
TACATTTTTATATAGTCTGTATATTTGTAAATCTTAAAAAAATAATTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               512-705, gnl|bosTau2|chr18 (22953986-22953787)
               

               
               512-705, gnl|Hg17|chr16 (56746990-56746762)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               512-705, gnl|bosTau2|chr18 (22953986-22953787)
               

               
               512-705, gnl|Hg17|chr16 (56746990-56746762)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               ret (0.128733)

	512-705, gnl\|bosTau2\|chr18 (22953986-22953787)
	512-705, gnl\|Hg17\|chr16 (56746990-56746762)