Non-Coding RNA Search

Ss1.1-rret37_k7.5

Sequence:


               
               TGAGTTTCACACATCTTTTGAGGATCTAAATTCCACAACTATCACTTTTTCTCCTGTTTT
TTCAGAAGGTATTTTTCCCTCTCCGGAAACCCAGGAAGTGCTTGAAATAACTACCAATCA
TCTTACTAACCCAAACTTTACAAATAATTCTTTGGAAATTAATCCAGCACAGGAAAACCC
ATTCTTTTTCAGCACAATTACTCAAACAGTTGAAGAATTAAATACAAATAAAGAATCTGT
TATTGCTATTTTGATACCTGCAGAAAATTCCAAACCTACAGTTAACTCTTTTATGCCCAC
CCCCAAAGAAACCATGGAAATGGAAGAAGACATAGACATTGAAGATTCATATAAGGATGC
AGACTATGAGACAGAAGTTTTACAAATTGAGCATTCTTACTGCAGACAAGATGTAAGTAA
GGAACACCTTTGGCAGAAGGTCTCTAAACTTCATTCAAAGATAACTCACCTTGAGTTACA
AGAACAACAAACTCTAGGAAGATTGAAGTCTTTGGAAGCTCTTATAAGGCAGCTAAAACA
GGAAAACTGGCTATCTGAAGAAAATGTCAAGATTATAGGAAACCATTTCACAACAAATGA
AGTTACGATGATATAAGAGGTTTTAAAGTTGTGACTTTTATGTAAGCTTTTTGTTGGCCA
GATCAGATTGTGTGTAAGTTTTTTCCTGTATAAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGTTTCACACATCTTTTGAGGATCTAAATTCCACAACTATCACTTTTTCTCCTGTTTT
TTCAGAAGGTATTTTTCCCTCTCCGGAAACCCAGGAAGTGCTTGAAATAACTACCAATCA
TCTTACTAACCCAAACTTTACAAATAATTCTTTGGAAATTAATCCAGCACAGGAAAACCC
ATTCTTTTTCAGCACAATTACTCAAACAGTTGAAGAATTAAATACAAATAAAGAATCTGT
TATTGCTATTTTGATACCTGCAGAAAATTCCAAACCTACAGTTAACTCTTTTATGCCCAC
CCCCAAAGAAACCATGGAAATGGAAGAAGACATAGACATTGAAGATTCATATAAGGATGC
AGACTATGAGACAGAAGTTTTACAAATTGAGCATTCTTACTGCAGACAAGATGTAAGTAA
GGAACACCTTTGGCAGAAGGTCTCTAAACTTCATTCAAAGATAACTCACCTTGAGTTACA
AGAACAACAAACTCTAGGAAGATTGAAGTCTTTGGAAGCTCTTATAAGGCAGCTAAAACA
GGAAAACTGGCTATCTGAAGAAAATGTCAAGATTATAGGAAACCATTTCACAACAAATGA
AGTTACGATGATATAAGAGGTTTTAAAGTTGTGACTTTTATGTAAGCTTTTTGTTGGCCA
GATCAGATTGTGTGTAAGTTTTTTCCTGTATAAATT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|51095140|gb|EAL24383.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51095140|gb|EAL24383.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               456-694, gnl|bosTau2|chr28 (13609401-13609646)
               

               
               456-694, gnl|Hg17|chr3 (16291724-16291479)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               456-694, gnl|bosTau2|chr28 (13609401-13609646)
               

               
               456-694, gnl|Hg17|chr3 (16291724-16291479)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fbs (0.175346)
               

               
               liv (0.146284)
               

               
               ret (0.128733)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               liv (0.146284)
               

               
               ret (0.128733)
               

               
               tra (0.123092)

	456-694, gnl\|bosTau2\|chr28 (13609401-13609646)
	456-694, gnl\|Hg17\|chr3 (16291724-16291479)