Non-Coding RNA Search

Ss1.1-rsag026_f24.5

Sequence:


               
               GTCTAGATGATAAAAATAAATAAAATTTTTAAATAAGAAATTTTATGTTTTAATCTTCCC
AACACTTTCATTCTTTAAGGCTACTTTCCTGCTGGTGAATAATTGAATAACATATTTACT
TTTAGCAAAACTCCTTAAAATAAAGAGACATTTATTCTAACATTGAAAATTACACTGCAA
GTGTTAATCATTAACTTGATGCATGCTAAAATGTAGCTTTTAAAAAGCATTCTGCATTAG
TACTAAAATAAGCCATCAATGCCAGTCCACCCTCTATTCATGGCTAAATATTTAAAGGTT
ATTTATAGCTTCTTTAATGAATTCTTGCTTAAACAAAGTGAAGTTATGTCCTAGAAAAGT
AGAAGCTATTTGTAACTAGAGCAGCACAACTGTAAAAGTTTTATGAATATGTATTTTAAT
AATAAGGGGGTGAGCCTGAGTCCCCACAAGTTAATGGATAATTTAGAACAGAGATTTTAA
AATGCCTAAAAATATAGAGGATTCTGTTCCTTAGTAACTTTTGATCAACTGCACATATAT
TTTTTAAAAACTGTTTTTCTCTCAGTCCACCCCCCACAAAACAGAGAACCACTAAGAGTA
CAATCACATACACACAAAGGAGCCCCCCACTCCAACTGCTTGTTCAGTGAGCCTTTCTGT
GTCAGATTTTCCCCGAGAAAAAAAATTGTGGGATTATTGTGGTTTTCTTTACAGACGTGT
AATTTCAAGAGTACTGTCATTAAATAATTTTCCGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCTAGATGATAAAAATAAATAAAATTTTTAAATAAGAAATTTTATGTTTTAATCTTCCC
AACACTTTCATTCTTTAAGGCTACTTTCCTGCTGGTGAATAATTGAATAACATATTTACT
TTTAGCAAAACTCCTTAAAATAAAGAGACATTTATTCTAACATTGAAAATTACACTGCAA
GTGTTAATCATTAACTTGATGCATGCTAAAATGTAGCTTTTAAAAAGCATTCTGCATTAG
TACTAAAATAAGCCATCAATGCCAGTCCACCCTCTATTCATGGCTAAATATTTAAAGGTT
ATTTATAGCTTCTTTAATGAATTCTTGCTTAAACAAAGTGAAGTTATGTCCTAGAAAAGT
AGAAGCTATTTGTAACTAGAGCAGCACAACTGTAAAAGTTTTATGAATATGTATTTTAAT
AATAAGGGGGTGAGCCTGAGTCCCCACAAGTTAATGGATAATTTAGAACAGAGATTTTAA
AATGCCTAAAAATATAGAGGATTCTGTTCCTTAGTAACTTTTGATCAACTGCACATATAT
TTTTTAAAAACTGTTTTTCTCTCAGTCCACCCCCCACAAAACAGAGAACCACTAAGAGTA
CAATCACATACACACAAAGGAGCCCCCCACTCCAACTGCTTGTTCAGTGAGCCTTTCTGT
GTCAGATTTTCCCCGAGAAAAAAAATTGTGGGATTATTGTGGTTTTCTTTACAGACGTGT
AATTTCAAGAGTACTGTCATTAAATAATTTTCCGTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-756, gnl|bosTau2|chr18 (33280039-33279276)
               

               
               1-756, gnl|Hg17|chr19 (35198619-35199351)
               

               
               1-756, gnl|Mm7|chr7 (34851931-34851160)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-756, gnl|bosTau2|chr18 (33280039-33279276)
               

               
               1-756, gnl|Hg17|chr19 (35198619-35199351)
               

               
               1-756, gnl|Mm7|chr7 (34851931-34851160)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               cbe (0.239234)
               

               
               sag (0.182715)
               

               
               fbs (0.175346)
               

               
               mga (0.160205)
               

               
               bfe (0.149858)
               

               
               hlv (0.139256)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               sag (0.182715)
               

               
               fbs (0.175346)
               

               
               mga (0.160205)
               

               
               bfe (0.149858)
               

               
               hlv (0.139256)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

	1-756, gnl\|bosTau2\|chr18 (33280039-33279276)
	1-756, gnl\|Hg17\|chr19 (35198619-35199351)
	1-756, gnl\|Mm7\|chr7 (34851931-34851160)

	cbe (0.239234)
	sag (0.182715)
	fbs (0.175346)
	mga (0.160205)
	bfe (0.149858)
	hlv (0.139256)
	kid (0.129735)
	ret (0.128733)