Non-Coding RNA Search

Ss1.1-rsag035_m14.5

Sequence:


               
               TTGGAAAATGTGTTTATTTTCTGCTTCATAGTTGGTGAAAGCTCCTAACTCTTTGGATTC
TAATTTCTTCTCTTTTTTCTTCATCAAGTAATTAAAGGTATGTGAGCAAGTTATCTCATA
TAGAAGGGAGACTTTCCTATTTAGAGGAACCCTTTGTGTGAGTGGTTTTGTCAAGCAATC
AACTTTTTCTCTATTTTAGGAGTTTGGATTTTCAAATGTAGATTTTCTTTAAGGGGACAC
ATAGGTATACAGGATGCTATAAAGAACTATGATTGTAGCACTAATCAGCAAGCATAAGAT
CATAGGTTACATCATTTCTCACTCTGGTTTCCAGGCAATTCAGTTGAAGTACTTAGGTTA
CAGTGCTGAAGAGACTTTTCATACCCTTACTTGAGAGTTTCTAATCTTAAGTTGTATTAA
ATGCAATAATATGTATTAGCTAGCAATATTTCTTTGATCACCAGCAACTCCAGATTTGAC
CTTGAAGTCTCTGAATGATGAAAACAGACCCAGCAGTGATACACTTTCCTGAATACCCCC
CCAAGTGCATTATATATCTTCTCATTTTGATCCTATGTTTGCAACAATGTATACATGAAT
ATTTTATTTCCTTTGTATTCATCTATTTTCTTATGATCAGTAATAAATATATTAATACAT
TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGAAAATGTGTTTATTTTCTGCTTCATAGTTGGTGAAAGCTCCTAACTCTTTGGATTC
TAATTTCTTCTCTTTTTTCTTCATCAAGTAATTAAAGGTATGTGAGCAAGTTATCTCATA
TAGAAGGGAGACTTTCCTATTTAGAGGAACCCTTTGTGTGAGTGGTTTTGTCAAGCAATC
AACTTTTTCTCTATTTTAGGAGTTTGGATTTTCAAATGTAGATTTTCTTTAAGGGGACAC
ATAGGTATACAGGATGCTATAAAGAACTATGATTGTAGCACTAATCAGCAAGCATAAGAT
CATAGGTTACATCATTTCTCACTCTGGTTTCCAGGCAATTCAGTTGAAGTACTTAGGTTA
CAGTGCTGAAGAGACTTTTCATACCCTTACTTGAGAGTTTCTAATCTTAAGTTGTATTAA
ATGCAATAATATGTATTAGCTAGCAATATTTCTTTGATCACCAGCAACTCCAGATTTGAC
CTTGAAGTCTCTGAATGATGAAAACAGACCCAGCAGTGATACACTTTCCTGAATACCCCC
CCAAGTGCATTATATATCTTCTCATTTTGATCCTATGTTTGCAACAATGTATACATGAAT
ATTTTATTTCCTTTGTATTCATCTATTTTCTTATGATCAGTAATAAATATATTAATACAT
TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-654, gnl|bosTau2|chr4 (4257704-4257043)
               

               
               14-654, gnl|Hg17|chr7 (91882403-91881754)
               

               
               14-654, gnl|Mm7|chr5 (3533845-3534405)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-654, gnl|bosTau2|chr4 (4257704-4257043)
               

               
               14-654, gnl|Hg17|chr7 (91882403-91881754)
               

               
               14-654, gnl|Mm7|chr5 (3533845-3534405)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sag (0.182715)
               

               
               thg (0.126791)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               thg (0.126791)

	14-654, gnl\|bosTau2\|chr4 (4257704-4257043)
	14-654, gnl\|Hg17\|chr7 (91882403-91881754)
	14-654, gnl\|Mm7\|chr5 (3533845-3534405)