Non-Coding RNA Search

Ss1.1-rsag038_l19.5

Sequence:


               
               GTACAGCCACTATGGGGAACGATATGGAGGTTCCTTAAAAAGCAGAAT------------
------------------------------------------------------------
------------------------------------------------------------
AATAGACACTGTCCACTGACAGATGAATAGATAAAG------------------------
CAAAAAAGAATGAAATAATCTCATTTGCAGCAACATAAATGGACCTAAAGATCATCATAC
TAAGCGAAGTAAGACAGAGAAAGATAAATGTCATATGATGTCACTTATATGTGGAAACAA
ACCCCCCAAAAAAAGATACAAATGAACTTATTTCCAAAACAGAGACTCACTGACATATAA
AACCGAAGGGAAAGGGGAAGACAAGAGATAAATTATATGAGTTTGGGTTAGCATATACAC
ACTACTATATGTAATATAATAGATGACCTACTGTATAGCACAGAGAACTATATTCAGTAT
TTTGTGATGACCTGTAGCAGAAAACATTCTAAAGAAGAATAAAATAAATAATATATGTAA
ATATACAATAGTATCTATAATATTTAATATATATAAATATATATAAACAATATGTATATT
ATATATATGAATCACTGTGCTGTATAGCTGAACTCAACATGATATTGTAAATCAACCAAA
CTTCAATAAAAAAATGAAAATGTTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACAGCCACTATGGGGAACGATATGGAGGTTCCTTAAAAAGCAGAAT------------
------------------------------------------------------------
------------------------------------------------------------
AATAGACACTGTCCACTGACAGATGAATAGATAAAG------------------------
CAAAAAAGAATGAAATAATCTCATTTGCAGCAACATAAATGGACCTAAAGATCATCATAC
TAAGCGAAGTAAGACAGAGAAAGATAAATGTCATATGATGTCACTTATATGTGGAAACAA
ACCCCCCAAAAAAAGATACAAATGAACTTATTTCCAAAACAGAGACTCACTGACATATAA
AACCGAAGGGAAAGGGGAAGACAAGAGATAAATTATATGAGTTTGGGTTAGCATATACAC
ACTACTATATGTAATATAATAGATGACCTACTGTATAGCACAGAGAACTATATTCAGTAT
TTTGTGATGACCTGTAGCAGAAAACATTCTAAAGAAGAATAAAATAAATAATATATGTAA
ATATACAATAGTATCTATAATATTTAATATATATAAATATATATAAACAATATGTATATT
ATATATATGAATCACTGTGCTGTATAGCTGAACTCAACATGATATTGTAAATCAACCAAA
CTTCAATAAAAAAATGAAAATGTTAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               44-443, gnl|bosTau2|chr1 (52488235-52487841)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-443, gnl|bosTau2|chr1 (52488235-52487841)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sag (0.182715)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               spl (0.143184)