Non-Coding RNA Search

Ss1.1-rsag04_o5.5

Sequence:


               
               TTTTTTTTTTTG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------CTTTAAAAAATATTAATCAAGCCTGATAATTAAAGT
AACAAGTGTTGATATTCTTTTCTATTCTATGAAGTTATGGAGCCCTTTGGGAAGACTCTA
TCTGTAAGATAGGTAAGCTGTTTATTAACTGTCATCACAGGAATGTTGAGAGAATTAACA
GTTGAATGTTGTAAAATTTTGTGTTTTCTTGAGTGAAGGATTTTGCAAATATTACAATAG
GATTAAGTTACCTTATTGAAGAGATCACAGGGATAGCATCTAATGCTTAATCATAGGCAC
TCAGTTTTTTTAAAAATTGAAGGGGATTTCTACATGATGAGTAGCCAAGGCATGGAGCTT
TCTTATTGTGTAGTCCATATCTTTAGCATAATTTAAGTACTTTTTTGGGTCTCAAGATTT
TTTTCCAGCAAGTATTAATATATTCTTCAATTTTCATTAATTACAGAAAAAAGAAGAGCT
CGTAAAAATTTTACAGAAGAAGAAGTAAATTACCTTTTCAGTGGAGTTAAGAAAATGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTG------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------CTTTAAAAAATATTAATCAAGCCTGATAATTAAAGT
AACAAGTGTTGATATTCTTTTCTATTCTATGAAGTTATGGAGCCCTTTGGGAAGACTCTA
TCTGTAAGATAGGTAAGCTGTTTATTAACTGTCATCACAGGAATGTTGAGAGAATTAACA
GTTGAATGTTGTAAAATTTTGTGTTTTCTTGAGTGAAGGATTTTGCAAATATTACAATAG
GATTAAGTTACCTTATTGAAGAGATCACAGGGATAGCATCTAATGCTTAATCATAGGCAC
TCAGTTTTTTTAAAAATTGAAGGGGATTTCTACATGATGAGTAGCCAAGGCATGGAGCTT
TCTTATTGTGTAGTCCATATCTTTAGCATAATTTAAGTACTTTTTTGGGTCTCAAGATTT
TTTTCCAGCAAGTATTAATATATTCTTCAATTTTCATTAATTACAGAAAAAAGAAGAGCT
CGTAAAAATTTTACAGAAGAAGAAGTAAATTACCTTTTCAGTGGAGTTAAGAAAATGGGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               15-528, gnl|bosTau2|chr18 (26723404-26722915)
               

               
               15-528, gnl|Hg17|chr16 (65347314-65346494)
               

               
               15-528, gnl|Mm7|chr8 (103047036-103046560)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-528, gnl|bosTau2|chr18 (26723404-26722915)
               

               
               15-528, gnl|Hg17|chr16 (65347314-65346494)
               

               
               15-528, gnl|Mm7|chr8 (103047036-103046560)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sag (0.182715)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)

	15-528, gnl\|bosTau2\|chr18 (26723404-26722915)
	15-528, gnl\|Hg17\|chr16 (65347314-65346494)
	15-528, gnl\|Mm7\|chr8 (103047036-103046560)