Non-Coding RNA Search

Ss1.1-rsag07_c6.5

Sequence:


               
               GAAATTCCACTTCCCCAGAGTTAGGGAGCCGGGGAACATCTGCCTGTCCCACTTAGTGTT
GAAGACGATCAAAGTGTGGAAGAGAGGTTTTAGGATCATAGCGAAAAATGCTGAATGAAC
AGAGTATCCGTCACCGTGACGTTAGTTAAGATCTGAAGTGCTGCTTATCGTTCTTCCACA
CTCTGTTGTAATTGATAAGGTTGATTGATGAACTCTAGGACCAAAGTAGGTAGGGGATGT
GTACGTGTGTGCACTAATTTTATACAGGGAACGAGAAAGCACAACTTTATAAACTGGTTT
ATCATAAAGTATGGTGAAAACTGCAAAGTACTTAACATTGTAAAGGGTTGTTATTATTGC
ATATAATTTTTTCCTCTTGTTATAACTGAACGGGTCCCCTAGAATTCAGTTGTTTGTAAA
CCTTTCTCATGATTCTTTTAGTTAATTGCCATATGTCCCTGCTTGAGTATCTTGGAATGT
GAAGTACTATAATTAAGTTGTATTTTGTTTTTGGAATATCCACTCTCCTTGTTATACTGG
TGTCTCTCTGGGAATCTTATCAGATACATTTGGGGAAAGCACATCTAGCTTTACTATTTG
GACGTTGACACTGTAAAACAAATCAGAAGTGTTCTTCATCCTCCTCACACTAACTTTGTA
ATGTACTTGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATTCCACTTCCCCAGAGTTAGGGAGCCGGGGAACATCTGCCTGTCCCACTTAGTGTT
GAAGACGATCAAAGTGTGGAAGAGAGGTTTTAGGATCATAGCGAAAAATGCTGAATGAAC
AGAGTATCCGTCACCGTGACGTTAGTTAAGATCTGAAGTGCTGCTTATCGTTCTTCCACA
CTCTGTTGTAATTGATAAGGTTGATTGATGAACTCTAGGACCAAAGTAGGTAGGGGATGT
GTACGTGTGTGCACTAATTTTATACAGGGAACGAGAAAGCACAACTTTATAAACTGGTTT
ATCATAAAGTATGGTGAAAACTGCAAAGTACTTAACATTGTAAAGGGTTGTTATTATTGC
ATATAATTTTTTCCTCTTGTTATAACTGAACGGGTCCCCTAGAATTCAGTTGTTTGTAAA
CCTTTCTCATGATTCTTTTAGTTAATTGCCATATGTCCCTGCTTGAGTATCTTGGAATGT
GAAGTACTATAATTAAGTTGTATTTTGTTTTTGGAATATCCACTCTCCTTGTTATACTGG
TGTCTCTCTGGGAATCTTATCAGATACATTTGGGGAAAGCACATCTAGCTTTACTATTTG
GACGTTGACACTGTAAAACAAATCAGAAGTGTTCTTCATCCTCCTCACACTAACTTTGTA
ATGTACTTGGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-669, gnl|bosTau2|chr9 (20728008-20728689)
               

               
               3-669, gnl|Hg17|chr6 (111241865-111241250)
               

               
               3-669, gnl|Mm7|chr10 (40138056-40138658)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-669, gnl|bosTau2|chr9 (20728008-20728689)
               

               
               3-669, gnl|Hg17|chr6 (111241865-111241250)
               

               
               3-669, gnl|Mm7|chr10 (40138056-40138658)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sag (0.182715)
               

               
               lin (0.145603)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               lin (0.145603)

	3-669, gnl\|bosTau2\|chr9 (20728008-20728689)
	3-669, gnl\|Hg17\|chr6 (111241865-111241250)
	3-669, gnl\|Mm7\|chr10 (40138056-40138658)