Ss1.1-rsag10_j24.5
|
GCGGACGCGTGGGTCGACCCACGCGTCCGGCCTCTTTAATGAGGGTTCGTGTCTTTAAGT
CGTTAAAATATAAGCAAAAACAGAAAGGCTGTTTTCCCCTTGCAATGCTCCTCTTCCGTA
TGTACTCTCAAGATTTTCACTTTTGGGTTTTAAGTATGTGAACCTGAGCCTACCATTAAT
ATGAATTTCCCTATAAAATGATTATACATGTGAAAATTTATAAATGGACTAATACTGCTT
GTCTCCTCTCCCACCACATAAAACTGGTTCTTTAGATGCCAACAGTGCATTTGTGACTGT
CTTTATTCACAAATGTAACCGGAAACTTTTAAGCCAAACTATACTGTGTAAGCGCTACGG
GGCTTCCCCTGACACCGCACCCCCTAAATACAGTAACATTTACCTTATTCACCAGAGCCA
CCATGTTCAGTGTTTAGTACTAGAGCTGCTTTTTAAAAAATGCTAGCTTCATTATAATGT
CAAAAAAAAAAAAATACTGCATCGTGATTTTCAAACAAACGAATGAAGGGCTCTGATAGG
CTACTCGGAGTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGACGCGTGGGTCGACCCACGCGTCCGGCCTCTTTAATGAGGGTTCGTGTCTTTAAGT
CGTTAAAATATAAGCAAAAACAGAAAGGCTGTTTTCCCCTTGCAATGCTCCTCTTCCGTA
TGTACTCTCAAGATTTTCACTTTTGGGTTTTAAGTATGTGAACCTGAGCCTACCATTAAT
ATGAATTTCCCTATAAAATGATTATACATGTGAAAATTTATAAATGGACTAATACTGCTT
GTCTCCTCTCCCACCACATAAAACTGGTTCTTTAGATGCCAACAGTGCATTTGTGACTGT
CTTTATTCACAAATGTAACCGGAAACTTTTAAGCCAAACTATACTGTGTAAGCGCTACGG
GGCTTCCCCTGACACCGCACCCCCTAAATACAGTAACATTTACCTTATTCACCAGAGCCA
CCATGTTCAGTGTTTAGTACTAGAGCTGCTTTTTAAAAAATGCTAGCTTCATTATAATGT
CAAAAAAAAAAAAATACTGCATCGTGATTTTCAAACAAACGAATGAAGGGCTCTGATAGG
CTACTCGGAGTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
30-552, gnl|bosTau2|chr5 (30028302-30028815) |
|
30-552, gnl|canFam2|chr10 (12978186-12979082) |
|
30-552, gnl|dasNov1|scaffold_29543 (7370-6437) |
|
30-552, gnl|echTel1|scaffold_298040 (6223-7138) |
|
30-552, gnl|galGal2|chr1 (31822411-31823391) |
|
30-552, gnl|hg17|chr12 (66340416-66341321) |
|
30-552, gnl|Hg17|chr12 (66340821-66341332) |
|
30-552, gnl|loxAfr1|scaffold_11040 (10473-11378) |
|
30-552, gnl|mm7|chr10 (118257519-118256604) |
|
30-552, gnl|Mm7|chr10 (118257071-118256591) |
|
30-552, gnl|monDom2|scaffold_168 (385336-384364) |
|
30-552, gnl|oryCun1|scaffold_198108 (86099-86998) |
|
30-552, gnl|panTro1|chr10 (67863475-67864384) |
|
30-552, gnl|rheMac2|chr11 (64650624-64651515) |
|
30-552, gnl|rn3|chr7 (58137221-58136283) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
30-552, gnl|bosTau2|chr5 (30028302-30028815) |
|
30-552, gnl|canFam2|chr10 (12978186-12979082) |
|
30-552, gnl|dasNov1|scaffold_29543 (7370-6437) |
|
30-552, gnl|echTel1|scaffold_298040 (6223-7138) |
|
30-552, gnl|galGal2|chr1 (31822411-31823391) |
|
30-552, gnl|hg17|chr12 (66340416-66341321) |
|
30-552, gnl|Hg17|chr12 (66340821-66341332) |
|
30-552, gnl|loxAfr1|scaffold_11040 (10473-11378) |
|
30-552, gnl|mm7|chr10 (118257519-118256604) |
|
30-552, gnl|Mm7|chr10 (118257071-118256591) |
|
30-552, gnl|monDom2|scaffold_168 (385336-384364) |
|
30-552, gnl|oryCun1|scaffold_198108 (86099-86998) |
|
30-552, gnl|panTro1|chr10 (67863475-67864384) |
|
30-552, gnl|rheMac2|chr11 (64650624-64651515) |
|
30-552, gnl|rn3|chr7 (58137221-58136283) |
|
sag (0.182715) |
|
ldo (0.0970026) |
|
sag (0.182715) |
|
ldo (0.0970026) |
