Non-Coding RNA Search

Ss1.1-rsin05_o24.5

Sequence:


               
               AGGAAAACCTAAATTGAAGCAAGTTTTATCTGTGTGTTAGGCTATATTATCAGAGATCTT
AGCCTTAGCAGCAAACAAAGAAGAAAATCTTGTCACAAAGTTTCTACTACTATCCTGGGA
AAAGGAATACTGTGTTTCAGATTATGTCACATATTTTATTCTACTTGCTATTTAGGGGTA
AATTTGATGAAGATAGTGATTAAGGTCATGTAATCTTTTGCCTTGTACTAATGTCATTTT
TATCTGGCAGGCTTTTCTTTTTATTTTGATTTCTTTGTCTGGATTTGACTTTTAGAAAAT
AATGCACAGTGACAAAGCATTACAACCTGCATATCAGTTTCTATTGAAGAATGTATTTTT
ATGATTAGTAAAATCACATTCTGGTTTACACTGAATCTTTTGAAAGTTTAGGTGGTATGA
ATTAAATCATCAGAGATTGATCATCCCAGGCTGTCCCACAGTCCTGAAATCCAAATCCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAAAACCTAAATTGAAGCAAGTTTTATCTGTGTGTTAGGCTATATTATCAGAGATCTT
AGCCTTAGCAGCAAACAAAGAAGAAAATCTTGTCACAAAGTTTCTACTACTATCCTGGGA
AAAGGAATACTGTGTTTCAGATTATGTCACATATTTTATTCTACTTGCTATTTAGGGGTA
AATTTGATGAAGATAGTGATTAAGGTCATGTAATCTTTTGCCTTGTACTAATGTCATTTT
TATCTGGCAGGCTTTTCTTTTTATTTTGATTTCTTTGTCTGGATTTGACTTTTAGAAAAT
AATGCACAGTGACAAAGCATTACAACCTGCATATCAGTTTCTATTGAAGAATGTATTTTT
ATGATTAGTAAAATCACATTCTGGTTTACACTGAATCTTTTGAAAGTTTAGGTGGTATGA
ATTAAATCATCAGAGATTGATCATCCCAGGCTGTCCCACAGTCCTGAAATCCAAATCCTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-230, gnl|bosTau2|chr5 (23453613-23453846)
               


               
               348-480, gnl|bosTau2|chr5 (23454517-23454649)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-230, gnl|bosTau2|chr5 (23453613-23453846)
               


               
               348-480, gnl|bosTau2|chr5 (23454517-23454649)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sin (0.174948)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               lnt (0.142308)

	4-230, gnl\|bosTau2\|chr5 (23453613-23453846)

	348-480, gnl\|bosTau2\|chr5 (23454517-23454649)