Non-Coding RNA Search

Ss1.1-rsin07_a24.5

Sequence:


               
               GCAGCCGCAGCATAGGTCACAGATAGAGCTAAGCTCTGGTGTTGCTCTGGTATAGGCCTC
AGCCTCAGCTCCAATTTGACCCCCAGACCGGGAATGTCCATATGATGCAAGTGCAGCCAT
AAAAAAAATTAATTAAACAAAATGTCAGCTTGCTGAATTTTTAGAAAAGTTATCACTGTA
GTAATTAAGTTTGGGCTAATAGTACTTTAACCTGAAAAGGCTGAACTGCTCAAAAATCTA
AAATAGGGATGATTTAGAGCAGTCGGACTGAGATTTTTCACTATTTCTATAAAGCTAGAT
TTTTATTAGTAGTATGTGATATATTAATATGTATATATTATGTGTAAACTAACAACTGAA
TCTTCTTAAGAGTAATAACAATAATTATAATCCAGATTTTTTGTTCACACTAGTATTTGA
ACACTGGCCATATGGCTCAAACAGAGCCATAGCCAACCTTATATTTTCTAGGCAAATTCT
TCCTTACTTTCCCAGAGAGGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCCGCAGCATAGGTCACAGATAGAGCTAAGCTCTGGTGTTGCTCTGGTATAGGCCTC
AGCCTCAGCTCCAATTTGACCCCCAGACCGGGAATGTCCATATGATGCAAGTGCAGCCAT
AAAAAAAATTAATTAAACAAAATGTCAGCTTGCTGAATTTTTAGAAAAGTTATCACTGTA
GTAATTAAGTTTGGGCTAATAGTACTTTAACCTGAAAAGGCTGAACTGCTCAAAAATCTA
AAATAGGGATGATTTAGAGCAGTCGGACTGAGATTTTTCACTATTTCTATAAAGCTAGAT
TTTTATTAGTAGTATGTGATATATTAATATGTATATATTATGTGTAAACTAACAACTGAA
TCTTCTTAAGAGTAATAACAATAATTATAATCCAGATTTTTTGTTCACACTAGTATTTGA
ACACTGGCCATATGGCTCAAACAGAGCCATAGCCAACCTTATATTTTCTAGGCAAATTCT
TCCTTACTTTCCCAGAGAGGAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               144-504, gnl|bosTau2|chr4 (61639497-61639855)
               

               
               144-504, gnl|Hg17|chr7 (143516209-143517068)
               

               
               144-504, gnl|Mm7|chr6 (43332196-43332504)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               144-504, gnl|bosTau2|chr4 (61639497-61639855)
               

               
               144-504, gnl|Hg17|chr7 (143516209-143517068)
               

               
               144-504, gnl|Mm7|chr6 (43332196-43332504)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sin (0.174948)
               

               
               lyg (0.133103)
               

               
               jej (0.0989218)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               lyg (0.133103)
               

               
               jej (0.0989218)

	144-504, gnl\|bosTau2\|chr4 (61639497-61639855)
	144-504, gnl\|Hg17\|chr7 (143516209-143517068)
	144-504, gnl\|Mm7\|chr6 (43332196-43332504)