Non-Coding RNA Search

Ss1.1-rsin08_a20.5

Sequence:


               
               GTGCCCTTACGTCTTGCCAACAATTATGTGCTTCACCTGTACCAAAGAAAAAATTCACTC
TTTTGAGAGGAGGGTAGTCTAGTCTGAATTAGTGAAAAAACTATGCATTAAAAATTGTGT
AAATGCAGTAACCATTACTTTTAAGTCCTGGAACATGATCTACCTAGTACTCAGAATAGA
AACAAAGTTTGAAGGACACTTGAAATAATGTATAAGTAATATATTGCTTTTAATATGTAA
ATAGTACCTCTAAAATGTTTGAAATAATCTGTTTTCTTAAGCAAATGAATGATGTTTGCA
AGGCTGTAGGAAACATATTTCTTATCTTAGAGATCACATTGCCAGCATTTGAATAAGTGA
GGCTTCGTTGTACATTTATCTGCATGTTATATATTGCTTGGTATTTATTCTCGTGTCCTT
TCATGTATGTGTGTTCTGCCTTCCACATTAAACTGGGAAATCCTTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCCTTACGTCTTGCCAACAATTATGTGCTTCACCTGTACCAAAGAAAAAATTCACTC
TTTTGAGAGGAGGGTAGTCTAGTCTGAATTAGTGAAAAAACTATGCATTAAAAATTGTGT
AAATGCAGTAACCATTACTTTTAAGTCCTGGAACATGATCTACCTAGTACTCAGAATAGA
AACAAAGTTTGAAGGACACTTGAAATAATGTATAAGTAATATATTGCTTTTAATATGTAA
ATAGTACCTCTAAAATGTTTGAAATAATCTGTTTTCTTAAGCAAATGAATGATGTTTGCA
AGGCTGTAGGAAACATATTTCTTATCTTAGAGATCACATTGCCAGCATTTGAATAAGTGA
GGCTTCGTTGTACATTTATCTGCATGTTATATATTGCTTGGTATTTATTCTCGTGTCCTT
TCATGTATGTGTGTTCTGCCTTCCACATTAAACTGGGAAATCCTTGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-467, gnl|bosTau2|chr23 (20961106-20960646)
               

               
               1-467, gnl|Hg17|chr6 (30411920-30414822)
               

               
               1-467, gnl|Mm7|chr17 (34412005-34411083)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-467, gnl|bosTau2|chr23 (20961106-20960646)
               

               
               1-467, gnl|Hg17|chr6 (30411920-30414822)
               

               
               1-467, gnl|Mm7|chr17 (34412005-34411083)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sin (0.349895)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.349895)

	1-467, gnl\|bosTau2\|chr23 (20961106-20960646)
	1-467, gnl\|Hg17\|chr6 (30411920-30414822)
	1-467, gnl\|Mm7\|chr17 (34412005-34411083)