Non-Coding RNA Search

Ss1.1-rsin10_e10.5

Sequence:


               
               AAGTGCAGCCAGAAAAAAAAAAAAAAAAAAGCAAGCTCAGTTCTTCTATAAAATCTAGGA
ACTTTTAAAAAACTCCTAATGGGCCCTTCTTTCAAAACACATTCATGTGCTAGGATAGCA
GTCAGATAGTTTGGTCTCTGTTATGGAGTTGGGTCACTTTTCACTAAGGGCAATCATAAA
TTATTGATAGGTCTTAGGCAAAGTAAAGACTTATTTTTACCCTTTACTTTAACAACACAT
GAAGTGACAAATTATTAAGTGCCAGAAATAAAGGAGGTAACTGTAACTGGTTCATTAGTA
AGCTTCCTTCTACTTCTGTATTACAGAACATTAAAATTTGTGACTATCTTTGGCTCCTAA
TTTTGCATACTTGGCAATTTATGGAAGATGATTGGAAATGGAAAAAGAATAGGAAGATAC
ACAGGGCTTTGTAAATATGGAATAACAATCCCTCCCCCTTTTTTCAACTGACCCCATAAG
AAGTTCCCAGGCCAGGGATCAAACCCATGCCACAGCAGACACTGCAGTGACAACACTGGA
TCCTTGGATCCCTAACCCTCTGTGCCACAAGGGAACTCCTAACAATCTATCTTTCTTAGA
AACCAGAATGTTTTCCATTTTTAAGCTGACTTTCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTGCAGCCAGAAAAAAAAAAAAAAAAAAGCAAGCTCAGTTCTTCTATAAAATCTAGGA
ACTTTTAAAAAACTCCTAATGGGCCCTTCTTTCAAAACACATTCATGTGCTAGGATAGCA
GTCAGATAGTTTGGTCTCTGTTATGGAGTTGGGTCACTTTTCACTAAGGGCAATCATAAA
TTATTGATAGGTCTTAGGCAAAGTAAAGACTTATTTTTACCCTTTACTTTAACAACACAT
GAAGTGACAAATTATTAAGTGCCAGAAATAAAGGAGGTAACTGTAACTGGTTCATTAGTA
AGCTTCCTTCTACTTCTGTATTACAGAACATTAAAATTTGTGACTATCTTTGGCTCCTAA
TTTTGCATACTTGGCAATTTATGGAAGATGATTGGAAATGGAAAAAGAATAGGAAGATAC
ACAGGGCTTTGTAAATATGGAATAACAATCCCTCCCCCTTTTTTCAACTGACCCCATAAG
AAGTTCCCAGGCCAGGGATCAAACCCATGCCACAGCAGACACTGCAGTGACAACACTGGA
TCCTTGGATCCCTAACCCTCTGTGCCACAAGGGAACTCCTAACAATCTATCTTTCTTAGA
AACCAGAATGTTTTCCATTTTTAAGCTGACTTTCCG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               143-448, gnl|bosTau2|chr7 (6973231-6972925)
               

               
               143-448, gnl|Hg17|chr19 (15307161-15308426)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               143-448, gnl|bosTau2|chr7 (6973231-6972925)
               

               
               143-448, gnl|Hg17|chr19 (15307161-15308426)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sin (0.174948)
               

               
               eye (0.170503)
               

               
               ecc (0.115035)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               eye (0.170503)
               

               
               ecc (0.115035)

	143-448, gnl\|bosTau2\|chr7 (6973231-6972925)
	143-448, gnl\|Hg17\|chr19 (15307161-15308426)