Non-Coding RNA Search

Ss1.1-rsin12_n2.5

Sequence:


               
               ATCAGAGAGTGTGTGTATGTCTCTGGGATGATGTTGGGCAGGGGTTAAAATTTAAAGGGG
AAAACAAAACTACCTATTTTCATTGGTTATTCAGCAGTGCCTAAAATGAACTTTTGAAGT
AATACAAATGCACTTTGAATTCATGTGTATAGTGCCATCTGATATCTTGGGTAAGTCTTG
CCTTTTCTTTTTCTCTCCCCAGCCCTTACTTAATTGAATGCCACAGAGATGTTTCTTAAT
ATCCATCTAAGGCTCCAAAGTACAGGAAACATGTACTTTCTTCCAGATTTAAAGAATCAT
AAAATGTTTGTTTTGTTGAAATTTGCTTTCGGTTTTGTGATTACACTTTAGAATATGTGC
TTAAAATTGGGTTTTTTATTTTAGCCCAAAGATATATTAAAAAAGTGTAACATTTTTCTA
TGTTAAGACTTTGAAAACTTTTAATTACCTGGAAAACATAGATTCTTAACTAAATATTCT
TAACTTGATTTCTAGGATCACATTTCTAAGAATAAAGGGAAGCACTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCAGAGAGTGTGTGTATGTCTCTGGGATGATGTTGGGCAGGGGTTAAAATTTAAAGGGG
AAAACAAAACTACCTATTTTCATTGGTTATTCAGCAGTGCCTAAAATGAACTTTTGAAGT
AATACAAATGCACTTTGAATTCATGTGTATAGTGCCATCTGATATCTTGGGTAAGTCTTG
CCTTTTCTTTTTCTCTCCCCAGCCCTTACTTAATTGAATGCCACAGAGATGTTTCTTAAT
ATCCATCTAAGGCTCCAAAGTACAGGAAACATGTACTTTCTTCCAGATTTAAAGAATCAT
AAAATGTTTGTTTTGTTGAAATTTGCTTTCGGTTTTGTGATTACACTTTAGAATATGTGC
TTAAAATTGGGTTTTTTATTTTAGCCCAAAGATATATTAAAAAAGTGTAACATTTTTCTA
TGTTAAGACTTTGAAAACTTTTAATTACCTGGAAAACATAGATTCTTAACTAAATATTCT
TAACTTGATTTCTAGGATCACATTTCTAAGAATAAAGGGAAGCACTAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-528, gnl|bosTau2|chr10 (22499234-22499755)
               

               
               2-528, gnl|Hg17|chr15 (36434428-36435284)
               

               
               2-528, gnl|Mm7|chr2 (116921939-116922466)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-528, gnl|bosTau2|chr10 (22499234-22499755)
               

               
               2-528, gnl|Hg17|chr15 (36434428-36435284)
               

               
               2-528, gnl|Mm7|chr2 (116921939-116922466)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               sin (0.174948)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               isp (0.150376)

	2-528, gnl\|bosTau2\|chr10 (22499234-22499755)
	2-528, gnl\|Hg17\|chr15 (36434428-36435284)
	2-528, gnl\|Mm7\|chr2 (116921939-116922466)