Ss1.1-rsin17_c22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGAGAGTTACGATATTGTGATATCCAATTGTGTCATTAACCTTGTACCTGATAAACAGC AAGTGCTTCAGGAGGTATATCGAGTGCTAAAGCACGGCGGGGAGCTATATTTCAGTGACG TCTATGCTAGCCTTGAATTGCCAGAAGAAATCAGGACACACAAAGTTTTATGGGGTGAAT GCCTGGGTGGTGCTTTGTACTGGAAGGACCTTGCAATCCTTGCCCGAGAAATTGTTTTCT CTCCTCCACGTTTGGTTGCTGCCAATTTCATTACAATTCAAAACAAGGAACTAGAAAGTG TGGTTGGTGACTGTCGTTTTGTTTCTGCAACATTTCGCCTCTTCAAACTCTCTAAGACAG GACCAACCAAAAGATGCAAAGTTATTTACAATGGAGGAATCACTGGACATGAAAAAGAGC TAATATTTGATGTAAATTTCACATTTAAGAAAGATGAAACTGTTGAAGTGGATGAAGAAA CAGCAGCTATCTTGAAGAATTCACGATTTACCCAAGATTTTCTGATCAGACCTATTGAAG AGAAGTTGCCAATATGTGGTGGCTATACTGCTCTAGAAACAAAGGATAAAATCACAGATC CATTCAAGCTTGCAGAAGAGTCTGACAGTGCGAAGTCTAGAAGTTCCCCTGATGTTGCTG GTGGCTGCTGTGGCACAAAGAAATGCTAAAACTGGGAGTTCCCATCATGGCTCAGTGGAA TTGAATCTGACTGGTATCCATGAGGACACAGGTTTGATCCCTGGCCCCGCTCAGTGGATT AAGGATCTGGTGTTGCCGTGAGCTGTGGTGTAGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGAGAGTTACGATATTGTGATATCCAATTGTGTCATTAACCTTGTACCTGATAAACAGC AAGTGCTTCAGGAGGTATATCGAGTGCTAAAGCACGGCGGGGAGCTATATTTCAGTGACG TCTATGCTAGCCTTGAATTGCCAGAAGAAATCAGGACACACAAAGTTTTATGGGGTGAAT GCCTGGGTGGTGCTTTGTACTGGAAGGACCTTGCAATCCTTGCCCGAGAAATTGTTTTCT CTCCTCCACGTTTGGTTGCTGCCAATTTCATTACAATTCAAAACAAGGAACTAGAAAGTG TGGTTGGTGACTGTCGTTTTGTTTCTGCAACATTTCGCCTCTTCAAACTCTCTAAGACAG GACCAACCAAAAGATGCAAAGTTATTTACAATGGAGGAATCACTGGACATGAAAAAGAGC TAATATTTGATGTAAATTTCACATTTAAGAAAGATGAAACTGTTGAAGTGGATGAAGAAA CAGCAGCTATCTTGAAGAATTCACGATTTACCCAAGATTTTCTGATCAGACCTATTGAAG AGAAGTTGCCAATATGTGGTGGCTATACTGCTCTAGAAACAAAGGATAAAATCACAGATC CATTCAAGCTTGCAGAAGAGTCTGACAGTGCGAAGTCTAGAAGTTCCCCTGATGTTGCTG GTGGCTGCTGTGGCACAAAGAAATGCTAAAACTGGGAGTTCCCATCATGGCTCAGTGGAA TTGAATCTGACTGGTATCCATGAGGACACAGGTTTGATCCCTGGCCCCGCTCAGTGGATT AAGGATCTGGTGTTGCCGTGAGCTGTGGTGTAGGTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-687, gnl|bosTau2|chr2 (46197654-46196976) | |
| 91-198, gnl|bosTau2|chr26 (15434639-15434746) | |
| 91-198, gnl|canFam2|chr28 (18337950-18338049) | |
| 91-198, gnl|danRer3|chrUn (40051786-40051884) | |
| 91-198, gnl|dasNov1|scaffold_3475 (97410-97512) | |
| 91-198, gnl|fr1|chrUn (164414715-164414806) | |
| 91-198, gnl|hg17|chr10 (104626687-104626789) | |
| 91-198, gnl|Hg17|chr10 (104626699-104626806) | |
| 91-198, gnl|loxAfr1|scaffold_112986 (1487-1586) | |
| 91-198, gnl|mm7|chr19 (46612105-46612207) | |
| 91-198, gnl|Mm7|chr19 (46612117-46612223) | |
| 91-198, gnl|monDom2|scaffold_14 (60439621-60439520) | |
| 91-198, gnl|oryCun1|scaffold_207171 (30835-30733) | |
| 91-198, gnl|panTro1|chr8 (106389627-106389729) | |
| 91-198, gnl|rheMac2|chr9 (102559537-102559639) | |
| 91-198, gnl|rn3|chr1 (252299873-252299975) | |
| 91-198, gnl|tetNig1|chr18 (5048407-5048308) | |
| 91-198, gnl|xenTro1|scaffold_87 (890071-890175) | |
| 306-449, gnl|bosTau2|chr26 (15436144-15436287) | |
| 306-449, gnl|Hg17|chr10 (104628595-104628738) | |
| 306-449, gnl|Mm7|chr19 (46620810-46620953) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-687, gnl|bosTau2|chr2 (46197654-46196976) | |
| 91-198, gnl|bosTau2|chr26 (15434639-15434746) | |
| 91-198, gnl|canFam2|chr28 (18337950-18338049) | |
| 91-198, gnl|danRer3|chrUn (40051786-40051884) | |
| 91-198, gnl|dasNov1|scaffold_3475 (97410-97512) | |
| 91-198, gnl|fr1|chrUn (164414715-164414806) | |
| 91-198, gnl|hg17|chr10 (104626687-104626789) | |
| 91-198, gnl|Hg17|chr10 (104626699-104626806) | |
| 91-198, gnl|loxAfr1|scaffold_112986 (1487-1586) | |
| 91-198, gnl|mm7|chr19 (46612105-46612207) | |
| 91-198, gnl|Mm7|chr19 (46612117-46612223) | |
| 91-198, gnl|monDom2|scaffold_14 (60439621-60439520) | |
| 91-198, gnl|oryCun1|scaffold_207171 (30835-30733) | |
| 91-198, gnl|panTro1|chr8 (106389627-106389729) | |
| 91-198, gnl|rheMac2|chr9 (102559537-102559639) | |
| 91-198, gnl|rn3|chr1 (252299873-252299975) | |
| 91-198, gnl|tetNig1|chr18 (5048407-5048308) | |
| 91-198, gnl|xenTro1|scaffold_87 (890071-890175) | |
| 306-449, gnl|bosTau2|chr26 (15436144-15436287) | |
| 306-449, gnl|Hg17|chr10 (104628595-104628738) | |
| 306-449, gnl|Mm7|chr19 (46620810-46620953) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sin (0.174948) | |
| cki (0.165235) | |
| lun (0.150489) |