Ss1.1-rsin19_g24.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCCCCTACTGCCCGAGGAGGATCGCTTGGACCTGAACCCGTCCTTTCTGGGCATCGCCC TGCGCTCCCTGCTGGCCATTGACCTGTGGCTGTCCAAGAAGCTGGGGGTGTGCGCGGGGG AGAGCTCTTCCTGGGGCAGCGTGCGGCCCCTTATGAAACTACTGGAGATCTCGGGACACG GCATCCCCTGGCTGCTGGGCACCCTGTACTGCCTGTCCAGGAGCGACAGCTGGGCCGGGC GCGAAGTTCTAACGAACCTGCTCTTCGCTCTGCTTCTGGACTTGCTCCTGGTGGCCCTGA TCAAGGGGCTGGTCCGCAGACGCCGCCCGACCCACAACCAAATGGACATGTTTTTCACCC TTTCTGTGGACAAGTACTCCTTCCCCTCGGGCCACGCCACGAGGGCCGCTCTAGTGTCGC GGTTCATCCTGAACCACCTGGTGCTAGCCATTCCGTTGAGGGTGTTGGTGGTACTATGGG CCTTCATCTTGGGCCTCTCCAGGGTCATGCTGGGACGGCATAATGTAACCGACGTGGCTT TGGCTTTTTTTTGGGCTACACACAGTACAGCATTGTGAACTATTGCTGGCTTTCACCTTA CAATGCACCGTTCCTCTTTGTATTGTGGAACCAACAATGACTCTATCTCATTCATTAAGG CACCAGGAGATCTGAAGGTTTCCACATGTGATGATGCTGACATAAACCAGCAGCCATCCA GACATTTCAGGCTTCCTTTGGGATTTCAGGTGCCCTGCCATCTTGATGGGTTCCTAGGCT GGAGCACGTGCTGGCCATTACTGATCACAGCCATAGTATAGAAAACAAAAAACTCTACTG TATACTTATCTAACACTGTTTATATCTCCAGGAGAACTGCAAAGAAACCAAGTTGGGATG ATTATAATGTTGCTACTTTTTAAAAGGTGACATCAGTAAATTTTGTGTTTTGTGGTAATC CTGAGGTTGCTGAGGAGATCAGAGGAACTGAGAGCCTGGGGGGAGGCTCACCACATATGT CAGTGGACCAGTATGGAAGGAGATGGGCCCTGCTGCCTGTCATTTCTACTGAATAAAAAA TAATGCTCATTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCCCCTACTGCCCGAGGAGGATCGCTTGGACCTGAACCCGTCCTTTCTGGGCATCGCCC TGCGCTCCCTGCTGGCCATTGACCTGTGGCTGTCCAAGAAGCTGGGGGTGTGCGCGGGGG AGAGCTCTTCCTGGGGCAGCGTGCGGCCCCTTATGAAACTACTGGAGATCTCGGGACACG GCATCCCCTGGCTGCTGGGCACCCTGTACTGCCTGTCCAGGAGCGACAGCTGGGCCGGGC GCGAAGTTCTAACGAACCTGCTCTTCGCTCTGCTTCTGGACTTGCTCCTGGTGGCCCTGA TCAAGGGGCTGGTCCGCAGACGCCGCCCGACCCACAACCAAATGGACATGTTTTTCACCC TTTCTGTGGACAAGTACTCCTTCCCCTCGGGCCACGCCACGAGGGCCGCTCTAGTGTCGC GGTTCATCCTGAACCACCTGGTGCTAGCCATTCCGTTGAGGGTGTTGGTGGTACTATGGG CCTTCATCTTGGGCCTCTCCAGGGTCATGCTGGGACGGCATAATGTAACCGACGTGGCTT TGGCTTTTTTTTGGGCTACACACAGTACAGCATTGTGAACTATTGCTGGCTTTCACCTTA CAATGCACCGTTCCTCTTTGTATTGTGGAACCAACAATGACTCTATCTCATTCATTAAGG CACCAGGAGATCTGAAGGTTTCCACATGTGATGATGCTGACATAAACCAGCAGCCATCCA GACATTTCAGGCTTCCTTTGGGATTTCAGGTGCCCTGCCATCTTGATGGGTTCCTAGGCT GGAGCACGTGCTGGCCATTACTGATCACAGCCATAGTATAGAAAACAAAAAACTCTACTG TATACTTATCTAACACTGTTTATATCTCCAGGAGAACTGCAAAGAAACCAAGTTGGGATG ATTATAATGTTGCTACTTTTTAAAAGGTGACATCAGTAAATTTTGTGTTTTGTGGTAATC CTGAGGTTGCTGAGGAGATCAGAGGAACTGAGAGCCTGGGGGGAGGCTCACCACATATGT CAGTGGACCAGTATGGAAGGAGATGGGCCCTGCTGCCTGTCATTTCTACTGAATAAAAAA TAATGCTCATTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-718, gnl|bosTau2|chr8 (18625831-18625113) | |
| 1-718, gnl|Hg17|chr9 (4652623-4653341) | |
| 1-718, gnl|Mm7|chr19 (28664077-28664795) | |
| 10-262, gnl|bosTau2|chr11 (81888201-81888453) | |
| 10-262, gnl|Hg17|chr9 (131195132-131195384) | |
| 10-262, gnl|Mm7|chr2 (32103316-32103568) | |
| 766-946, gnl|bosTau2|chr8 (18625030-18624838) | |
| 766-946, gnl|Hg17|chr9 (4653403-4653602) | |
| 766-946, gnl|Mm7|chr19 (28664845-28665022) | |
| 963-1092, gnl|bosTau2|chr8 (18624090-18623959) | |
| 963-1092, gnl|canFam2|chr1 (96105391-96105560) | |
| 963-1092, gnl|dasNov1|scaffold_9300 (46388-46239) | |
| 963-1092, gnl|echTel1|scaffold_182297 (1408-1549) | |
| 963-1092, gnl|hg17|chr9 (4654116-4654305) | |
| 963-1092, gnl|Hg17|chr9 (4654134-4654267) | |
| 963-1092, gnl|mm7|chr19 (28665480-28665659) | |
| 963-1092, gnl|Mm7|chr19 (28665492-28665621) | |
| 963-1092, gnl|monDom2|scaffold_5 (112000665-112000493) | |
| 963-1092, gnl|oryCun1|scaffold_187007 (3704-3891) | |
| 963-1092, gnl|panTro1|chr11 (4653608-4653797) | |
| 963-1092, gnl|rheMac2|chr15 (72547316-72547132) | |
| 963-1092, gnl|rn3|chr1 (232764358-232764537) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-718, gnl|bosTau2|chr8 (18625831-18625113) | |
| 1-718, gnl|Hg17|chr9 (4652623-4653341) | |
| 1-718, gnl|Mm7|chr19 (28664077-28664795) | |
| 10-262, gnl|bosTau2|chr11 (81888201-81888453) | |
| 10-262, gnl|Hg17|chr9 (131195132-131195384) | |
| 10-262, gnl|Mm7|chr2 (32103316-32103568) | |
| 766-946, gnl|bosTau2|chr8 (18625030-18624838) | |
| 766-946, gnl|Hg17|chr9 (4653403-4653602) | |
| 766-946, gnl|Mm7|chr19 (28664845-28665022) | |
| 963-1092, gnl|bosTau2|chr8 (18624090-18623959) | |
| 963-1092, gnl|canFam2|chr1 (96105391-96105560) | |
| 963-1092, gnl|dasNov1|scaffold_9300 (46388-46239) | |
| 963-1092, gnl|echTel1|scaffold_182297 (1408-1549) | |
| 963-1092, gnl|hg17|chr9 (4654116-4654305) | |
| 963-1092, gnl|Hg17|chr9 (4654134-4654267) | |
| 963-1092, gnl|mm7|chr19 (28665480-28665659) | |
| 963-1092, gnl|Mm7|chr19 (28665492-28665621) | |
| 963-1092, gnl|monDom2|scaffold_5 (112000665-112000493) | |
| 963-1092, gnl|oryCun1|scaffold_187007 (3704-3891) | |
| 963-1092, gnl|panTro1|chr11 (4653608-4653797) | |
| 963-1092, gnl|rheMac2|chr15 (72547316-72547132) | |
| 963-1092, gnl|rn3|chr1 (232764358-232764537) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| amn (0.417711) | |
| cte (0.29274) | |
| sin (0.174948) | |
| nmm (0.132802) | |
| cov (0.132153) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) | |
| cte (0.29274) | |
| sin (0.174948) | |
| nmm (0.132802) | |
| cov (0.132153) |