Non-Coding RNA Search

Ss1.1-rsin21_k21.5

Sequence:


               
               GATGCTGGTTCCTGGGGGGCTGGGATATGATAGATTCCCAGCACAACACAGACAAGAAGT
CGTGGATAAGGTTGTCAGTCCCTGGAGAATCCTGGAGAATTATTCCTATGACAGATACCA
CCCCATGGGGGAGATCTATCAGTGGATGAGTCAGATAAGGGAGAATTACCCGGAAGTGGT
GACACAGCATTTCCTAGGAATGACCTATGAGAGCCGGCCCATGTATTATTTGAAGATCAG
CCAACCATCCAATAACCCCAAGAAGATTCTCTGGATGGACTGCGGAATTCATGCCAGGGA
ATGGATTGCCCCTGCTTTCTGCCAGTGGTTTGTGAAAGAAATTCTACAAAACTATAAAGA
CAGCTCAAGGATAAGAAGGCTCCTTAAGAACCTGGACTTCTATGTGCTTCCAGTTCTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGCTGGTTCCTGGGGGGCTGGGATATGATAGATTCCCAGCACAACACAGACAAGAAGT
CGTGGATAAGGTTGTCAGTCCCTGGAGAATCCTGGAGAATTATTCCTATGACAGATACCA
CCCCATGGGGGAGATCTATCAGTGGATGAGTCAGATAAGGGAGAATTACCCGGAAGTGGT
GACACAGCATTTCCTAGGAATGACCTATGAGAGCCGGCCCATGTATTATTTGAAGATCAG
CCAACCATCCAATAACCCCAAGAAGATTCTCTGGATGGACTGCGGAATTCATGCCAGGGA
ATGGATTGCCCCTGCTTTCTGCCAGTGGTTTGTGAAAGAAATTCTACAAAACTATAAAGA
CAGCTCAAGGATAAGAAGGCTCCTTAAGAACCTGGACTTCTATGTGCTTCCAGTTCTTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               234-340, gnl|bosTau2|chr2 (58000341-58000235)
               

               
               234-340, gnl|Hg17|chr2 (207648529-207648635)
               

               
               234-340, gnl|Mm7|chr1 (64164595-64164690)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               234-340, gnl|bosTau2|chr2 (58000341-58000235)
               

               
               234-340, gnl|Hg17|chr2 (207648529-207648635)
               

               
               234-340, gnl|Mm7|chr1 (64164595-64164690)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sin (0.174948)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               jej (0.0989218)

	234-340, gnl\|bosTau2\|chr2 (58000341-58000235)
	234-340, gnl\|Hg17\|chr2 (207648529-207648635)
	234-340, gnl\|Mm7\|chr1 (64164595-64164690)