Non-Coding RNA Search

Ss1.1-rsin21_m19.5

Sequence:


               
               GAAAGAGGTGCAGAGTGATTAGCTGACACCACTTTGTGGAAAAGGAACAGGCTCACTTAC
CACTATCTTTATCTTTTCGGTGATCACTGAGAAGTAAAGCTCTGTGATAACTCCTCTCTC
TCACTTGCTCCACTGAAGTTGAGGCAGTCCTACAAAATCAAGTCACATAATCTGTTCAAA
AGCTACTGCTGGCTAGATCATTCTTTGCCCCTCGATGATCAACATATCCTCTCAGATCAA
GACTTTTACTCTTTGGAGAAAATACTTTGGTGGGAAAATGGATCCCCCCGCCTTTGCAGT
TCTCCAGAGCTGTTGAGATTTTTATATTCTTATTTCAGGAACTCAATTAGACTCCATCCC
TTTGTCTTAGGCAATCACTTGGTGAAAAGGAGATGGGAGTTGAAGGGTAGCATATTAACG
TTCAGAATGTCACTTCGGGTTACCAAAAGGACCAGATATACACCCCTTACAAATTACCTT
GTGTCTGGATTATAAGACTAGCAGGAATCTCTCAGGGGTAAGAGGAGCAAAGAGCAAAGT
GAATGTGGCCTCCTGCCCTTTGACAAGACCATTCTATGTCCAGCTTCTTCTATTCCTATT
GAAGAAACACTAAACCATGGGTTGTTCTCTCAGAGTAACTGGTAGAGGTGGTTAAGAAAT
CACAAGAGGAGTTCCCATTGTGGCTCAGCAGTAAAGAACCCAATGAGTATCCATGAAGAT
ACATGTTTGATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAGAGGTGCAGAGTGATTAGCTGACACCACTTTGTGGAAAAGGAACAGGCTCACTTAC
CACTATCTTTATCTTTTCGGTGATCACTGAGAAGTAAAGCTCTGTGATAACTCCTCTCTC
TCACTTGCTCCACTGAAGTTGAGGCAGTCCTACAAAATCAAGTCACATAATCTGTTCAAA
AGCTACTGCTGGCTAGATCATTCTTTGCCCCTCGATGATCAACATATCCTCTCAGATCAA
GACTTTTACTCTTTGGAGAAAATACTTTGGTGGGAAAATGGATCCCCCCGCCTTTGCAGT
TCTCCAGAGCTGTTGAGATTTTTATATTCTTATTTCAGGAACTCAATTAGACTCCATCCC
TTTGTCTTAGGCAATCACTTGGTGAAAAGGAGATGGGAGTTGAAGGGTAGCATATTAACG
TTCAGAATGTCACTTCGGGTTACCAAAAGGACCAGATATACACCCCTTACAAATTACCTT
GTGTCTGGATTATAAGACTAGCAGGAATCTCTCAGGGGTAAGAGGAGCAAAGAGCAAAGT
GAATGTGGCCTCCTGCCCTTTGACAAGACCATTCTATGTCCAGCTTCTTCTATTCCTATT
GAAGAAACACTAAACCATGGGTTGTTCTCTCAGAGTAACTGGTAGAGGTGGTTAAGAAAT
CACAAGAGGAGTTCCCATTGTGGCTCAGCAGTAAAGAACCCAATGAGTATCCATGAAGAT
ACATGTTTGATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-660, gnl|bosTau2|chr4 (22267299-22266658)
               

               
               7-660, gnl|Hg17|chr7 (104344822-104343892)
               

               
               7-660, gnl|Mm7|chr5 (22540879-22540273)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-660, gnl|bosTau2|chr4 (22267299-22266658)
               

               
               7-660, gnl|Hg17|chr7 (104344822-104343892)
               

               
               7-660, gnl|Mm7|chr5 (22540879-22540273)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sin (0.174948)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)

	7-660, gnl\|bosTau2\|chr4 (22267299-22266658)
	7-660, gnl\|Hg17\|chr7 (104344822-104343892)
	7-660, gnl\|Mm7\|chr5 (22540879-22540273)