Non-Coding RNA Search

Ss1.1-rsin23_d16.5

Sequence:


               
               TTCCAGGGTTCTCCCAACTCCAGAGCTTAGGACCCTGAGTCCTAGTAATGAACCAGCATC
TGTTATCAGAGATTACTTGTTACCTGGTAGGTGTCATTTAAGAAGACAGACCAGTCATTT
TAGTCTCTTGAGATAATAACAGAAAATTGAAGCCTACATTCTTTTTTACTGAATGCAAGT
TTAGAAATTGATTCTGTGTTTTAAATCAAGGTGTGTCTTGATCCCAACAGTTTATGTGGG
TCATTTTTTTCTAGTTTGGAGTTCTGGGGAAAGAACCTTAAAAACCCCATGTGATTCTGC
AGCATTAGATCTATTGACCTTTTGGGCAAACCCAGACAGAGATCCTTTATTGTGTTTTGC
ATTTCATGAGATTTACTGAAATAAGAATTTACTGTGATTGTGCAGTCTTCTGGCCAGTGT
CCAGCAGCTCTGCTTTAATTTGGTCAGTTTTATTTTCTCTGCACAGGGAAAAGAGGCACA
ATTTAATCTTTGCTTCCATAAGCATGTTAAAGCTCATGTGTTAATTCATTCTTAGGCTCC
TGTATTAAATGCCTTGGATAAACGGTTAAATGGACACGTGCTCAGCTTTAATTTTTTTGC
AACAGAAAGATCTGGCTTCCGTATGGCATTGTTGGTTTTCAGAGGCTCTCTGGGGTGTTG
GTAAATCTAAATGAATGTTGCCTTTACTTTTTCCAGCGTGTAATGTATATAACCATGTGA
TTCATGCTGCAAGTCAAATCAGGAAGCACTACAGTGTTGAAGCCAGAGGATTGTTCAGTT
CATTTGTCTTCCTGATCCTCCTGCTTTATTTCCCATGTCAGTGTTTACATTCCATACTTG
TATTTTCTGTGAAAGAAAAAATTAAATAAAACCTGGCAGTTTGAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCAGGGTTCTCCCAACTCCAGAGCTTAGGACCCTGAGTCCTAGTAATGAACCAGCATC
TGTTATCAGAGATTACTTGTTACCTGGTAGGTGTCATTTAAGAAGACAGACCAGTCATTT
TAGTCTCTTGAGATAATAACAGAAAATTGAAGCCTACATTCTTTTTTACTGAATGCAAGT
TTAGAAATTGATTCTGTGTTTTAAATCAAGGTGTGTCTTGATCCCAACAGTTTATGTGGG
TCATTTTTTTCTAGTTTGGAGTTCTGGGGAAAGAACCTTAAAAACCCCATGTGATTCTGC
AGCATTAGATCTATTGACCTTTTGGGCAAACCCAGACAGAGATCCTTTATTGTGTTTTGC
ATTTCATGAGATTTACTGAAATAAGAATTTACTGTGATTGTGCAGTCTTCTGGCCAGTGT
CCAGCAGCTCTGCTTTAATTTGGTCAGTTTTATTTTCTCTGCACAGGGAAAAGAGGCACA
ATTTAATCTTTGCTTCCATAAGCATGTTAAAGCTCATGTGTTAATTCATTCTTAGGCTCC
TGTATTAAATGCCTTGGATAAACGGTTAAATGGACACGTGCTCAGCTTTAATTTTTTTGC
AACAGAAAGATCTGGCTTCCGTATGGCATTGTTGGTTTTCAGAGGCTCTCTGGGGTGTTG
GTAAATCTAAATGAATGTTGCCTTTACTTTTTCCAGCGTGTAATGTATATAACCATGTGA
TTCATGCTGCAAGTCAAATCAGGAAGCACTACAGTGTTGAAGCCAGAGGATTGTTCAGTT
CATTTGTCTTCCTGATCCTCCTGCTTTATTTCCCATGTCAGTGTTTACATTCCATACTTG
TATTTTCTGTGAAAGAAAAAATTAAATAAAACCTGGCAGTTTGAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               632-900, gnl|bosTau2|chrX (24002087-24001809)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               632-900, gnl|bosTau2|chrX (24002087-24001809)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               gul (0.355177)
               

               
               sin (0.349895)
               

               
               ece (0.229305)
               

               
               sag (0.182715)
               

               
               eye (0.170503)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.355177)
               

               
               sin (0.349895)
               

               
               ece (0.229305)
               

               
               sag (0.182715)
               

               
               eye (0.170503)

	gul (0.355177)
	sin (0.349895)
	ece (0.229305)
	sag (0.182715)
	eye (0.170503)