Non-Coding RNA Search

Ss1.1-rsin25_f20.5

Sequence:


               
               AACAAATATTCTATCTAACAGCCTGCAGGTCGTTAACAGGCCATCCATTGGAGCCTTGGA
AATCTTATATGTGGGTAGGAAAATAAAAATCAAAACTGCACTCTAATCGATTTCAAGTAA
AATTAATGTCAATTGCCAATATTCCAGCTGTGCCACTAATAAAGAAATAGTTTATATCAA
GGAAGAAAGTACCTTATTCAGGAAAATTAAATTCCAGCTCCCTGGTCACCCATTATCATT
TTGTCTTCACTGACCACTAGGTAACCATTTCTTTAGTTGCAGAACAGCCATCCACATGTT
TGCTATTAGGGAAGGCGATAATTAAAGATGTATGTTCAGTGCTGACTGTTTGTATTCTGC
ACATTCTTAATTTAATTTGTATTTTTTTCCCCTTTTCTTTGTAAAATCCTGTTTGCTGAC
TTGGTGTTGAGGCTGGAGCTGACTGCCCTGGCCAGCAGTCCAGTCCAGATTCAGGAGCAA
TTGCAAAACTTCTGTCCCGGGTGGGTGGAAGCCATATGTTTTGGGGAGGTGCTGGAGTGA
ATGAAATCCTTCCTACTCTTTTAAAATCCCTCTTCCTCAGCCAAATCTGAGAGTGACATG
AAATTGGCCTCACAAAAGCCTGTCTTATAAAGGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAAATATTCTATCTAACAGCCTGCAGGTCGTTAACAGGCCATCCATTGGAGCCTTGGA
AATCTTATATGTGGGTAGGAAAATAAAAATCAAAACTGCACTCTAATCGATTTCAAGTAA
AATTAATGTCAATTGCCAATATTCCAGCTGTGCCACTAATAAAGAAATAGTTTATATCAA
GGAAGAAAGTACCTTATTCAGGAAAATTAAATTCCAGCTCCCTGGTCACCCATTATCATT
TTGTCTTCACTGACCACTAGGTAACCATTTCTTTAGTTGCAGAACAGCCATCCACATGTT
TGCTATTAGGGAAGGCGATAATTAAAGATGTATGTTCAGTGCTGACTGTTTGTATTCTGC
ACATTCTTAATTTAATTTGTATTTTTTTCCCCTTTTCTTTGTAAAATCCTGTTTGCTGAC
TTGGTGTTGAGGCTGGAGCTGACTGCCCTGGCCAGCAGTCCAGTCCAGATTCAGGAGCAA
TTGCAAAACTTCTGTCCCGGGTGGGTGGAAGCCATATGTTTTGGGGAGGTGCTGGAGTGA
ATGAAATCCTTCCTACTCTTTTAAAATCCCTCTTCCTCAGCCAAATCTGAGAGTGACATG
AAATTGGCCTCACAAAAGCCTGTCTTATAAAGGTTG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               81-636, gnl|bosTau2|chr20 (16796432-16795877)
               

               
               81-636, gnl|Hg17|chr5 (43684055-43684602)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-636, gnl|bosTau2|chr20 (16796432-16795877)
               

               
               81-636, gnl|Hg17|chr5 (43684055-43684602)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sin (0.174948)
               

               
               cki (0.165235)
               

               
               cst (0.140036)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               cki (0.165235)
               

               
               cst (0.140036)

	81-636, gnl\|bosTau2\|chr20 (16796432-16795877)
	81-636, gnl\|Hg17\|chr5 (43684055-43684602)