Non-Coding RNA Search

Ss1.1-rsin26_m6.5

Sequence:


               
               TTTAGCCAGAGTTCCAAACTCCTCATCCACCAGAGAGTCCACACCGGAGAGAAGCCCTAC
GAGTGCAGCAAGTGTGGGAAGGGCTTCAGCCAGAGCTCCAACCTCCACATCCACCAGCGG
GTCCACCGGAAAGATCCTCATTAAATGAGGTCTTCAGTCACATGCTCGTACTCTCAAGAA
ATAAATGTTTTTTAACATTGCTCTTACTTTTCTACTCTTAGGAGGTAGTAAGAGTTACTC
AGATATGTTCCTTAACTGAAAATCATTCATTTAAAGTATTTAAGTACCAAGCACTTTGTT
ATGCTACACAGCAAATTGATTGTTCTTGTTCCTCAGATGGGTAAAGTGAAAAACGTCTGT
ACTTTGCCGTTGAGCCAGTGTTACTAGAGCTACATATCCTACCCAGCGTTTTTAAGTGCA
AGAACCTTACATTTGTCAAAGCAGAACATATTTCTCTTTGTTCACATCCTCTGAGAAATT
GGAACTTTGGCTTCTCTTCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGCCAGAGTTCCAAACTCCTCATCCACCAGAGAGTCCACACCGGAGAGAAGCCCTAC
GAGTGCAGCAAGTGTGGGAAGGGCTTCAGCCAGAGCTCCAACCTCCACATCCACCAGCGG
GTCCACCGGAAAGATCCTCATTAAATGAGGTCTTCAGTCACATGCTCGTACTCTCAAGAA
ATAAATGTTTTTTAACATTGCTCTTACTTTTCTACTCTTAGGAGGTAGTAAGAGTTACTC
AGATATGTTCCTTAACTGAAAATCATTCATTTAAAGTATTTAAGTACCAAGCACTTTGTT
ATGCTACACAGCAAATTGATTGTTCTTGTTCCTCAGATGGGTAAAGTGAAAAACGTCTGT
ACTTTGCCGTTGAGCCAGTGTTACTAGAGCTACATATCCTACCCAGCGTTTTTAAGTGCA
AGAACCTTACATTTGTCAAAGCAGAACATATTTCTCTTTGTTCACATCCTCTGAGAAATT
GGAACTTTGGCTTCTCTTCAAAAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|49087122|ref|NP_032642.2|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|49087122|ref|NP_032642.2|

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               1-129, gnl|bosTau2|chr14 (25895068-25895196)
               

               
               1-129, gnl|Hg17|chr19 (49431504-49431632)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-129, gnl|bosTau2|chr14 (25895068-25895196)
               

               
               1-129, gnl|Hg17|chr19 (49431504-49431632)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               aor (0.195274)
               

               
               sin (0.174948)
               

               
               ski (0.146735)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               sin (0.174948)
               

               
               ski (0.146735)

	1-129, gnl\|bosTau2\|chr14 (25895068-25895196)
	1-129, gnl\|Hg17\|chr19 (49431504-49431632)