Non-Coding RNA Search

Ss1.1-rsin29_g17.5

Sequence:


               
               AAAAGGTATGTTCCCCCAGGAGTATTTCTTGCCCCACCACCCAGCAAAGAAGAATTTAAG
TCTTGAGTGGTTCCCACTTGGCAGAATATTGGAGGCTTTGTCATTCTCTGCTTGCCTTTT
TGTACCTTAGGCCTGTTACTCTTGGTCTCTAAAAGATCTTTTGCTGACATTGACCCTTAG
CAAAGCTGCTTGATCAAGATGGCCAAATGATGATATACCAGGCTCAAGCTCGTTGTGAAC
AAATGGATAGATGGTAGTTTGGGCCTTCTTTCTAGAGGTTTCCTATGTAGTCTACAAATA
AAATAAATGACTTTATGTTTTCAGTTTAATTTCCCAAGTGTTGAATGGTGTTTCCAGTGT
GCCAGGCACAGTCCTAGGTATGGATGAACTTGGAGTTGACAGGACAGTTTTCTACCCATT
GCACTGAAACACAGTTTCTTCCTCTGACTTAAGGAGATAGTATGTATTCTATTCATTTAT
ATGTGTGTTGTAACAAAGGATGGAGAAGGGTCCTGGAGAAAGGGGTGCTTATGAAGAGTC
TTACTTCATAAAGGTTATATATACTTCCTTTCAACCAGGTTCATTGCTTGAACAAAAATC
TCATTCCAGTTTGGTTGTTACTTTTAGTGCTATCTGGAGAAAAGCCTGTATTTTGACTTT
TATTTTCAATTTTAGAGTCCTGATAGCTTCAGGAGGGTGCATTGTAGGGCATCCTATAAA
CTTTTCTTCATGTACGTTTACGTATAGGAAATATGGCTTTTGTAGAAAAATTGAGATCTT
AAACCACTGAAATAGTATCATTGTGTTTCAGATAACTGAAGCTTGCTTCTTTAATTCATT
AATTAATTTCGGCCACCCCTGAGGTATATGAAAGTTCCCAGGCCAGGGATTGAGCTGAGC
TGCTGCAGTTGGATTCTTAATCCACTGGGAGCCACAGAAGAAACTCCTTGTAGGATTTTT
ATGTGTCTTAAAATTGCCTTTAAAATTTTCAAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGGTATGTTCCCCCAGGAGTATTTCTTGCCCCACCACCCAGCAAAGAAGAATTTAAG
TCTTGAGTGGTTCCCACTTGGCAGAATATTGGAGGCTTTGTCATTCTCTGCTTGCCTTTT
TGTACCTTAGGCCTGTTACTCTTGGTCTCTAAAAGATCTTTTGCTGACATTGACCCTTAG
CAAAGCTGCTTGATCAAGATGGCCAAATGATGATATACCAGGCTCAAGCTCGTTGTGAAC
AAATGGATAGATGGTAGTTTGGGCCTTCTTTCTAGAGGTTTCCTATGTAGTCTACAAATA
AAATAAATGACTTTATGTTTTCAGTTTAATTTCCCAAGTGTTGAATGGTGTTTCCAGTGT
GCCAGGCACAGTCCTAGGTATGGATGAACTTGGAGTTGACAGGACAGTTTTCTACCCATT
GCACTGAAACACAGTTTCTTCCTCTGACTTAAGGAGATAGTATGTATTCTATTCATTTAT
ATGTGTGTTGTAACAAAGGATGGAGAAGGGTCCTGGAGAAAGGGGTGCTTATGAAGAGTC
TTACTTCATAAAGGTTATATATACTTCCTTTCAACCAGGTTCATTGCTTGAACAAAAATC
TCATTCCAGTTTGGTTGTTACTTTTAGTGCTATCTGGAGAAAAGCCTGTATTTTGACTTT
TATTTTCAATTTTAGAGTCCTGATAGCTTCAGGAGGGTGCATTGTAGGGCATCCTATAAA
CTTTTCTTCATGTACGTTTACGTATAGGAAATATGGCTTTTGTAGAAAAATTGAGATCTT
AAACCACTGAAATAGTATCATTGTGTTTCAGATAACTGAAGCTTGCTTCTTTAATTCATT
AATTAATTTCGGCCACCCCTGAGGTATATGAAAGTTCCCAGGCCAGGGATTGAGCTGAGC
TGCTGCAGTTGGATTCTTAATCCACTGGGAGCCACAGAAGAAACTCCTTGTAGGATTTTT
ATGTGTCTTAAAATTGCCTTTAAAATTTTCAAGTTT

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               4-834, gnl|bosTau2|chr22 (37841997-37841195)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-834, gnl|bosTau2|chr22 (37841997-37841195)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sin (0.174948)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)