Non-Coding RNA Search

Ss1.1-rski0108_l5.5

Sequence:


               
               TCGGTGCGCGCCTCTTCGGGTTATGGAGGCTTGTGTTTTTATGGACTTGCTTGTTCGTAG
AAAGTGGGAAGTGATGAACAAAGTATATGCTGTTGCACTTATTGACTCTGAACATCATGT
AGGACACCAGCTGGGGAGTGACGTTCAGTTATTAGCATGGATAAAGCACCACTGCCGTGA
ATGGGTAACAAGCCCGAAGCCTTTGGATAAACCTGCAGCTACTGTTTTGAAAAAGGAGTT
TCCTATGGTTTCTGCTGGTACAGAAAAACACAACTTAGCCCCTTCCTCTAGCCTTCAGTC
AATTTTTAAATACTTTAGAAAAGCTTTGAAAGCCAAAGAAGCTATTAATTTCTCTCAAGT
GCCAATAGTCACTAGAAGCTCCACAAAAAGAAAGCAAAGTACTTAAGTTACTTTTTTGTT
ATCTAAGTTTTTTTTTTGTCCCACTGAAACTTTGCTAATGTGGTGCTAGAAGAAAAAAAT
ACTTCCGGCTCATATGCAGTATTATGTTCTGGCTTGAAAGTATGATTTGTTACCTTTTTA
AAAAAGTGAAAATGGTCTCTTTTGTAGCCTACTGATGAATCAGTGAGTACCGTCATGAAT
ATTTTACAGTACTAGTCAAATCCAATTACTCAAATTAGAGAATCTTTTCTTTTGAAAAAA
TTTCTTATGGTTTAGAATGACACCAAAACTATAGTTGATAGAAATTAAATATTAAGTCAG
TCTTTGATTTCTATGTTACTGCTATATTAAGATTATAAACATAAAAATTAAATATCATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGGTGCGCGCCTCTTCGGGTTATGGAGGCTTGTGTTTTTATGGACTTGCTTGTTCGTAG
AAAGTGGGAAGTGATGAACAAAGTATATGCTGTTGCACTTATTGACTCTGAACATCATGT
AGGACACCAGCTGGGGAGTGACGTTCAGTTATTAGCATGGATAAAGCACCACTGCCGTGA
ATGGGTAACAAGCCCGAAGCCTTTGGATAAACCTGCAGCTACTGTTTTGAAAAAGGAGTT
TCCTATGGTTTCTGCTGGTACAGAAAAACACAACTTAGCCCCTTCCTCTAGCCTTCAGTC
AATTTTTAAATACTTTAGAAAAGCTTTGAAAGCCAAAGAAGCTATTAATTTCTCTCAAGT
GCCAATAGTCACTAGAAGCTCCACAAAAAGAAAGCAAAGTACTTAAGTTACTTTTTTGTT
ATCTAAGTTTTTTTTTTGTCCCACTGAAACTTTGCTAATGTGGTGCTAGAAGAAAAAAAT
ACTTCCGGCTCATATGCAGTATTATGTTCTGGCTTGAAAGTATGATTTGTTACCTTTTTA
AAAAAGTGAAAATGGTCTCTTTTGTAGCCTACTGATGAATCAGTGAGTACCGTCATGAAT
ATTTTACAGTACTAGTCAAATCCAATTACTCAAATTAGAGAATCTTTTCTTTTGAAAAAA
TTTCTTATGGTTTAGAATGACACCAAAACTATAGTTGATAGAAATTAAATATTAAGTCAG
TCTTTGATTTCTATGTTACTGCTATATTAAGATTATAAACATAAAAATTAAATATCATAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|15451325|dbj|BAB64466.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|15451325|dbj|BAB64466.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               19-780, gnl|bosTau2|chr11 (21801375-21800609)
               

               
               19-780, gnl|Hg17|chr3 (102724127-102725332)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-780, gnl|bosTau2|chr11 (21801375-21800609)
               

               
               19-780, gnl|Hg17|chr3 (102724127-102725332)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lun (0.150489)
               

               
               ski (0.146735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.150489)
               

               
               ski (0.146735)

	19-780, gnl\|bosTau2\|chr11 (21801375-21800609)
	19-780, gnl\|Hg17\|chr3 (102724127-102725332)