Non-Coding RNA Search

Ss1.1-rski0115_g14.5

Sequence:


               
               GGGAGAGTCACTTACAGGCTATAATTTAATTCTAGTCATTTGCATAGCTTCTGGTTGTGG
TTTAATGAAAGTGACTTTTTCATTGTACCCATTGACAGATTTAGCAGATACTTTTACTAG
TTTATTCATGTTATAGTTTTGGCATTCAGGGTACATTTACACAATTAAACACAAATATTC
TGAAAGCACTGATAATCACACTGGCCCCTATCTCATAATTTTGTCTAGAAGATGACTTTG
TAAAATACCCTAAAAAGTATTAAAGTGTATGAAACCCTGCAGTGTTTTATATGTCTCAAA
TATTCATTTAAAAAAATCTATTAAACTTGACAGCCTATCCTTCTTGGGTACCAGAGGCAA
GACAGTTTTGTTTTGCTTAAAAAAAATTTTTTTTTTCTTTAAAAGAAATTCTTCACCTGT
GGCACTTGGCAATATTAGTAGATAATGAATAATTCAGAACTAGGAGACTACATGAGGGTT
ATAAAGACATCACACTGGGAAAAGTAGGATAATAACACTTCTTTAGATTATATTTAGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGAGTCACTTACAGGCTATAATTTAATTCTAGTCATTTGCATAGCTTCTGGTTGTGG
TTTAATGAAAGTGACTTTTTCATTGTACCCATTGACAGATTTAGCAGATACTTTTACTAG
TTTATTCATGTTATAGTTTTGGCATTCAGGGTACATTTACACAATTAAACACAAATATTC
TGAAAGCACTGATAATCACACTGGCCCCTATCTCATAATTTTGTCTAGAAGATGACTTTG
TAAAATACCCTAAAAAGTATTAAAGTGTATGAAACCCTGCAGTGTTTTATATGTCTCAAA
TATTCATTTAAAAAAATCTATTAAACTTGACAGCCTATCCTTCTTGGGTACCAGAGGCAA
GACAGTTTTGTTTTGCTTAAAAAAAATTTTTTTTTTCTTTAAAAGAAATTCTTCACCTGT
GGCACTTGGCAATATTAGTAGATAATGAATAATTCAGAACTAGGAGACTACATGAGGGTT
ATAAAGACATCACACTGGGAAAAGTAGGATAATAACACTTCTTTAGATTATATTTAGATT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               67-439, gnl|bosTau2|chr12 (11230202-11229814)
               

               
               67-439, gnl|Hg17|chr13 (51506016-51505675)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-439, gnl|bosTau2|chr12 (11230202-11229814)
               

               
               67-439, gnl|Hg17|chr13 (51506016-51505675)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ski (0.146735)
               

               
               ute (0.132784)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               ute (0.132784)

	67-439, gnl\|bosTau2\|chr12 (11230202-11229814)
	67-439, gnl\|Hg17\|chr13 (51506016-51505675)