Non-Coding RNA Search

Ss1.1-rski0116_n22.5

Sequence:


               
               AGGCAAAAGCAAGAGTCTGCATCAAGTCTGTTAGGAAGCATGAAATTATATAGTCAGGGT
GGTAAGCAGACAAGAGTCTCTGAGGCCCGAGGATACCATGGCAGAGAGCGAACAGACTCG
AGTTCCTTTCACTCAGATAGCATCACCCCACTCTATGAATATGTCCAAGAACAAAAGTGC
TATTACCTTGAATAGTAATTTTGAACCAACAGAAAACAGACACAAGATAAGAACTCAAAG
AAGTGAGACATAAAACATGGAACTGAGATATTAACATGATCCCTTCTTTTGGTAGTGAGG
GTATATGTCTGATCTTTTATTTTAACTGTAGTACACTATTCTATTTCTTTTGTTTGGTGC
AAGTTTTCTTTTGTAAGGCTCCATAAACACTGAGCCCTTTGGTTACAAAATAGTGGATGG
AAGAAGTAAACTGCATTTGGGACTATATTTAGAACTATATGATAATGTGATTGGGTGCTC
TGGAATAAAGTGAGCATTTAAAAAATTTTCTGAGTCATAAATATGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCAAAAGCAAGAGTCTGCATCAAGTCTGTTAGGAAGCATGAAATTATATAGTCAGGGT
GGTAAGCAGACAAGAGTCTCTGAGGCCCGAGGATACCATGGCAGAGAGCGAACAGACTCG
AGTTCCTTTCACTCAGATAGCATCACCCCACTCTATGAATATGTCCAAGAACAAAAGTGC
TATTACCTTGAATAGTAATTTTGAACCAACAGAAAACAGACACAAGATAAGAACTCAAAG
AAGTGAGACATAAAACATGGAACTGAGATATTAACATGATCCCTTCTTTTGGTAGTGAGG
GTATATGTCTGATCTTTTATTTTAACTGTAGTACACTATTCTATTTCTTTTGTTTGGTGC
AAGTTTTCTTTTGTAAGGCTCCATAAACACTGAGCCCTTTGGTTACAAAATAGTGGATGG
AAGAAGTAAACTGCATTTGGGACTATATTTAGAACTATATGATAATGTGATTGGGTGCTC
TGGAATAAAGTGAGCATTTAAAAAATTTTCTGAGTCATAAATATGGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-512, gnl|bosTau2|chr5 (35202940-35203451)
               

               
               1-512, gnl|Hg17|chr1 (149135415-149134568)
               

               
               1-512, gnl|Mm7|chr3 (93321914-93322416)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-512, gnl|bosTau2|chr5 (35202940-35203451)
               

               
               1-512, gnl|Hg17|chr1 (149135415-149134568)
               

               
               1-512, gnl|Mm7|chr3 (93321914-93322416)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               csk (0.281492)
               

               
               ski (0.146735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.281492)
               

               
               ski (0.146735)

	1-512, gnl\|bosTau2\|chr5 (35202940-35203451)
	1-512, gnl\|Hg17\|chr1 (149135415-149134568)
	1-512, gnl\|Mm7\|chr3 (93321914-93322416)