Non-Coding RNA Search

Ss1.1-rski0117_a13.5

Sequence:


               
               ACGAATTTATTTTATCATGATAATATCATTGAGAAACAGTTAACATGTAATTGTGAAGGT
CAAGGCAAGGGTAACAGTCGGCGAACTGGGGGTTTAGTCCAACTGCATTGTGCACATGAG
GCTAAATATAGGGAAGGGATCTGGGGGAGGCAGGAATGGTATTGAATGCAGATGGGGGTG
CTTGAACCTAGGGCTTGGTAGATCACAGAATGATAAAGCTGGTTGTCATTTATAACATGG
AAAAGTTAAAATGAAAGACACTTTCACACGGATGTGATGGTGGCTGGCTCATGGTTGATA
GTCAAGTATGAGTTCAGCAAGAGAATCCACCACAGCGGGGGCGGAAGCAAGTTGTACGGC
AGCAGGTGGTCTGGCAGCGGACTGGACGGCAGCAGCTGGACACAGGACAGCTGGGGCGGC
AGGTGGTCTGCCAGCAGCTGGGGCGGCAGGTGGTCTGGCAACAGACTGGACGGCAGCAGC
TGGACACAGGACAGCTGGGGCGGCAGGTGGTCTGGCAGCAGACTGGGCGGCAGCAGGTGG
TCCTGCAGCAGGTGGTCTGGCAGCAGACTGGGCGGCAGCAGGTCTCCTGGCAGAGACCTC
GGCCACAGCCTGGTCAGAGCAGATGGAGCCACAACAGGAGCTGACCATGGTGTCTGAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGAATTTATTTTATCATGATAATATCATTGAGAAACAGTTAACATGTAATTGTGAAGGT
CAAGGCAAGGGTAACAGTCGGCGAACTGGGGGTTTAGTCCAACTGCATTGTGCACATGAG
GCTAAATATAGGGAAGGGATCTGGGGGAGGCAGGAATGGTATTGAATGCAGATGGGGGTG
CTTGAACCTAGGGCTTGGTAGATCACAGAATGATAAAGCTGGTTGTCATTTATAACATGG
AAAAGTTAAAATGAAAGACACTTTCACACGGATGTGATGGTGGCTGGCTCATGGTTGATA
GTCAAGTATGAGTTCAGCAAGAGAATCCACCACAGCGGGGGCGGAAGCAAGTTGTACGGC
AGCAGGTGGTCTGGCAGCGGACTGGACGGCAGCAGCTGGACACAGGACAGCTGGGGCGGC
AGGTGGTCTGCCAGCAGCTGGGGCGGCAGGTGGTCTGGCAACAGACTGGACGGCAGCAGC
TGGACACAGGACAGCTGGGGCGGCAGGTGGTCTGGCAGCAGACTGGGCGGCAGCAGGTGG
TCCTGCAGCAGGTGGTCTGGCAGCAGACTGGGCGGCAGCAGGTCTCCTGGCAGAGACCTC
GGCCACAGCCTGGTCAGAGCAGATGGAGCCACAACAGGAGCTGACCATGGTGTCTGAGGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               KR410_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               KR410_HUMAN

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               315-660, gnl|bosTau2|chr23 (876284-875932)
               

               
               315-660, gnl|Hg17|chr17 (36527750-36528105)
               


               
               333-644, gnl|bosTau2|chr19 (33501564-33501245)
               

               
               333-644, gnl|Hg17|chr17 (36515477-36515171)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               315-660, gnl|bosTau2|chr23 (876284-875932)
               

               
               315-660, gnl|Hg17|chr17 (36527750-36528105)
               


               
               333-644, gnl|bosTau2|chr19 (33501564-33501245)
               

               
               333-644, gnl|Hg17|chr17 (36515477-36515171)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ski (0.29347)
               

               
               nep (0.183925)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.29347)
               

               
               nep (0.183925)

	315-660, gnl\|bosTau2\|chr23 (876284-875932)
	315-660, gnl\|Hg17\|chr17 (36527750-36528105)

	333-644, gnl\|bosTau2\|chr19 (33501564-33501245)
	333-644, gnl\|Hg17\|chr17 (36515477-36515171)