Non-Coding RNA Search

Ss1.1-rski0119_g20.5

Sequence:


               
               TATCTTGGGAAAAGAAAGGCCAACTCTCCTAGTCTGTGTGGTCATCACTGCTCAGGTAAT
CCCAGGAGAGTAAGGGCCATGGCCTGGAGCAGTGGCTTTCTTTTGTGGCAGTGCTGGGTC
CAGAAGAGGCTTGCAGGCTCCTCACTGTCCCTGATCCTATGAGGCTCATACCTGATGGAG
AAAAGGACTCTTGGGGGAGGCCTAGCCAATAGCTTATGAAATAAATAAACAAACGTGTTA
AATAACGTGATGGGATGGGATAGAGATGTTTTCTATTGTCTATGATCAAGGTAGATTGTT
TCTATACACAAAGGAGGATCACAGGGCAGTTAACTACAAAAGTCTCCTTGCAGGAAGAAC
TTTAGAGTATTTAAGCACTGTTTTGGTGTATACGACCAATTATTTTACTAAGACATTATG
ATTTTTAAAAATGTTAAAAAAATAAAGTTTTTAAGGAAACTGACTCCTTTGGAGAGGAAA
CATAAGGTTTATAAAGGCAAGATCCAGAAATTTTCAGACATTTTTCAAAGGACTTGAACT
ATTATTCTCGAAATGCTGTGGTACTTTTCCAAAATAACCACTTGGATATACAGGAAAGAT
TTTAAATGTTTCAGTATGATAGCTTTATTTTCCTTTTGCTAATTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCTTGGGAAAAGAAAGGCCAACTCTCCTAGTCTGTGTGGTCATCACTGCTCAGGTAAT
CCCAGGAGAGTAAGGGCCATGGCCTGGAGCAGTGGCTTTCTTTTGTGGCAGTGCTGGGTC
CAGAAGAGGCTTGCAGGCTCCTCACTGTCCCTGATCCTATGAGGCTCATACCTGATGGAG
AAAAGGACTCTTGGGGGAGGCCTAGCCAATAGCTTATGAAATAAATAAACAAACGTGTTA
AATAACGTGATGGGATGGGATAGAGATGTTTTCTATTGTCTATGATCAAGGTAGATTGTT
TCTATACACAAAGGAGGATCACAGGGCAGTTAACTACAAAAGTCTCCTTGCAGGAAGAAC
TTTAGAGTATTTAAGCACTGTTTTGGTGTATACGACCAATTATTTTACTAAGACATTATG
ATTTTTAAAAATGTTAAAAAAATAAAGTTTTTAAGGAAACTGACTCCTTTGGAGAGGAAA
CATAAGGTTTATAAAGGCAAGATCCAGAAATTTTCAGACATTTTTCAAAGGACTTGAACT
ATTATTCTCGAAATGCTGTGGTACTTTTCCAAAATAACCACTTGGATATACAGGAAAGAT
TTTAAATGTTTCAGTATGATAGCTTTATTTTCCTTTTGCTAATTTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-406, gnl|bosTau2|chr7 (51851225-51850784)
               

               
               2-406, gnl|Hg17|chr9 (92359106-92358651)
               

               
               2-406, gnl|Mm7|chr13 (49002735-49003141)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-406, gnl|bosTau2|chr7 (51851225-51850784)
               

               
               2-406, gnl|Hg17|chr9 (92359106-92358651)
               

               
               2-406, gnl|Mm7|chr13 (49002735-49003141)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               bfe (0.149858)
               

               
               ski (0.146735)
               

               
               csk (0.140746)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)
               

               
               ski (0.146735)
               

               
               csk (0.140746)

	2-406, gnl\|bosTau2\|chr7 (51851225-51850784)
	2-406, gnl\|Hg17\|chr9 (92359106-92358651)
	2-406, gnl\|Mm7\|chr13 (49002735-49003141)