Non-Coding RNA Search

Ss1.1-rski0121_m17.5

Sequence:


               
               ATAGGTTGGATTCCTCTGACATTACTCACTTGTGTACCTTACCTCATGGAAAGAGACTTT
GTACCATGTTTTGCTTCCTCTTTTAATGGTACTGTTTCCCCTCATCTTTTAACAGTAGAC
TTTAAAAAGAAGTGGAATTCAATTCAGAATGATGGTGATGGCTATTTGAGGCATTTTAAA
ATGATTTAGTGGTTAATATGTGGTTAATATTATTTATTCAACAGAAAATTGACTTTAAGC
CCATCTAAAAAGCCAAGTATCATAATTGTAAACTTCTTTTAAATGTTATACAACTTTGTT
TAATTTCGATTTTCAAAAAGTCCAGTTTCCCATCTGAGAGACTTGTGTGTGTCGGCCTGG
CTGGGGAATCCTCCAGAGAAAACAGGGCAGCTAAGCCACTGCGGAAGCAGAGTCGGTGAC
TGTGGGTGGCATTTCTCTGCTGAGTCAGGTCTGTGCCAGCCCTTCCCCAGGCTTTTACTA
ACAGTGTGGATTTTCTGACAAGATGCAAAACCCAAGTCTTGTGGTTCTTGAAACTCTCCT
GCAATTTTTCCCTTTTCCTTGGACTTTGGGAAATTTTCACTTAAGAAGATCTCACTTCTT
GCTCTGTCTTCCTGTAATTGCTAGAAAAAAATTGGGAACTTTTAGACTTATTCCTTTTAT
TTTTCCTACCATCTGGCCTATAAAGTAACACAGTGTTATCAGTATCATTTTGAAAATGAA
AGAAAAGAGTTTATGTACCCAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGGTTGGATTCCTCTGACATTACTCACTTGTGTACCTTACCTCATGGAAAGAGACTTT
GTACCATGTTTTGCTTCCTCTTTTAATGGTACTGTTTCCCCTCATCTTTTAACAGTAGAC
TTTAAAAAGAAGTGGAATTCAATTCAGAATGATGGTGATGGCTATTTGAGGCATTTTAAA
ATGATTTAGTGGTTAATATGTGGTTAATATTATTTATTCAACAGAAAATTGACTTTAAGC
CCATCTAAAAAGCCAAGTATCATAATTGTAAACTTCTTTTAAATGTTATACAACTTTGTT
TAATTTCGATTTTCAAAAAGTCCAGTTTCCCATCTGAGAGACTTGTGTGTGTCGGCCTGG
CTGGGGAATCCTCCAGAGAAAACAGGGCAGCTAAGCCACTGCGGAAGCAGAGTCGGTGAC
TGTGGGTGGCATTTCTCTGCTGAGTCAGGTCTGTGCCAGCCCTTCCCCAGGCTTTTACTA
ACAGTGTGGATTTTCTGACAAGATGCAAAACCCAAGTCTTGTGGTTCTTGAAACTCTCCT
GCAATTTTTCCCTTTTCCTTGGACTTTGGGAAATTTTCACTTAAGAAGATCTCACTTCTT
GCTCTGTCTTCCTGTAATTGCTAGAAAAAAATTGGGAACTTTTAGACTTATTCCTTTTAT
TTTTCCTACCATCTGGCCTATAAAGTAACACAGTGTTATCAGTATCATTTTGAAAATGAA
AGAAAAGAGTTTATGTACCCAGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-744, gnl|bosTau2|chr7 (56533741-56534485)
               

               
               1-744, gnl|Hg17|chr5 (88110934-88110189)
               

               
               1-744, gnl|Mm7|chr13 (80683919-80684642)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-744, gnl|bosTau2|chr7 (56533741-56534485)
               

               
               1-744, gnl|Hg17|chr5 (88110934-88110189)
               

               
               1-744, gnl|Mm7|chr13 (80683919-80684642)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ski (0.146735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)

	1-744, gnl\|bosTau2\|chr7 (56533741-56534485)
	1-744, gnl\|Hg17\|chr5 (88110934-88110189)
	1-744, gnl\|Mm7\|chr13 (80683919-80684642)