Ss1.1-rski0125_d8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGAATTTATAGAGAATCCAGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAAT GAATGCCTTCATGGTGTGGGCTAAAGATGAACGAAGGAAAATCCTTCAAGCCTTTCCCGA CATGCACAACTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACAAACCT AGAGAAACAGCCATATTACGAGGAGCAAGCCCGTCTCAGCAAACAGCACCTGGAGAAGTA CCCCGACTACAAATACAAGCCCAGGCCGAAGCGCACCTGCCTGGTAGATGGCAAGAAGCT GCGCATCGGCGAGTACAAGGCCATCATGCGGAACAGGCGGCAGGAGATGAGGCAGTACTT CAACGTTGGGCAACAAGCACAGATCCCCATCGCCACTGCTGGCGTTGTGTACCCTGGAGC CATCGCCATGGCGGGAATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCCAG CAGCCCGGAGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCC ACACATCAAAGAAGAGATCCAGGCTGAGGACATCAACGGAGAAATTTATGATGAGTACGA TGAGGAGGAAGACGATCCAGATGTAGATTATGGGAGTGACAGTGAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGAATTTATAGAGAATCCAGAGGGCGTGGTAGCAATGAACCCCACATAAAGCGTCCAAT GAATGCCTTCATGGTGTGGGCTAAAGATGAACGAAGGAAAATCCTTCAAGCCTTTCCCGA CATGCACAACTCCAACATCAGCAAGATACTGGGATCTCGCTGGAAAGCTATGACAAACCT AGAGAAACAGCCATATTACGAGGAGCAAGCCCGTCTCAGCAAACAGCACCTGGAGAAGTA CCCCGACTACAAATACAAGCCCAGGCCGAAGCGCACCTGCCTGGTAGATGGCAAGAAGCT GCGCATCGGCGAGTACAAGGCCATCATGCGGAACAGGCGGCAGGAGATGAGGCAGTACTT CAACGTTGGGCAACAAGCACAGATCCCCATCGCCACTGCTGGCGTTGTGTACCCTGGAGC CATCGCCATGGCGGGAATGCCCTCCCCTCACCTGCCCTCGGAGCACTCAAGCGTGTCCAG CAGCCCGGAGCCTGGGATGCCTGTTATCCAGAGCACTTACGGTGTGAAAGGAGAGGAGCC ACACATCAAAGAAGAGATCCAGGCTGAGGACATCAACGGAGAAATTTATGATGAGTACGA TGAGGAGGAAGACGATCCAGATGTAGATTATGGGAGTGACAGTGAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-153, gnl|bosTau2|chrX (10038553-10038705) | |
| 1-153, gnl|canFam2|chr27 (26858286-26858113) | |
| 1-153, gnl|canFam2|chr27 (26858290-26858098) | |
| 1-153, gnl|danRer3|chr4 (18550632-18550802) | |
| 1-153, gnl|danRer3|chr4 (18550625-18550818) | |
| 1-153, gnl|dasNov1|scaffold_3991 (73512-73339) | |
| 1-153, gnl|dasNov1|scaffold_3991 (73516-73324) | |
| 1-153, gnl|echTel1|scaffold_219718 (9075-9244) | |
| 1-153, gnl|echTel1|scaffold_219718 (9067-9259) | |
| 1-153, gnl|fr1|chrUn (158297282-158297122) | |
| 1-153, gnl|fr1|chrUn (158297288-158297098) | |
| 1-153, gnl|galGal2|chr1 (62767977-62767804) | |
| 1-153, gnl|galGal2|chr1 (62767981-62767787) | |
| 1-153, gnl|hg17|chr12 (23587408-23587600) | |
| 1-153, gnl|Hg17|chr12 (23587563-23587411) | |
| 1-153, gnl|hg17|chr8 (88870420-88870593) | |
| 1-153, gnl|loxAfr1|scaffold_16148 (9972-10141) | |
| 1-153, gnl|loxAfr1|scaffold_16148 (9964-10156) | |
| 1-153, gnl|mm7|chr6 (143931842-143932015) | |
| 1-153, gnl|mm7|chr6 (143931838-143932030) | |
| 1-153, gnl|Mm7|chr6 (143931993-143931841) | |
| 1-153, gnl|monDom2|scaffold_31 (2419398-2419226) | |
| 1-153, gnl|monDom2|scaffold_31 (2419403-2419210) | |
| 1-153, gnl|oryCun1|scaffold_198203 (12230-12402) | |
| 1-153, gnl|oryCun1|scaffold_198203 (12226-12418) | |
| 1-153, gnl|panTro1|chr7 (91048424-91048597) | |
| 1-153, gnl|panTro1|chrUn_random (49970335-49970527) | |
| 1-153, gnl|rheMac2|chr11 (23809931-23810104) | |
| 1-153, gnl|rheMac2|chr11 (23809927-23810119) | |
| 1-153, gnl|rn3|chr4 (180652188-180652361) | |
| 1-153, gnl|rn3|chr4 (180652184-180652376) | |
| 1-153, gnl|tetNig1|chrUn_random (55420560-55420400) | |
| 1-153, gnl|tetNig1|chrUn_random (55420566-55420400) | |
| 1-153, gnl|xenTro1|scaffold_1124 (165627-165454) | |
| 1-153, gnl|xenTro1|scaffold_1124 (165631-165439) | |
| 369-648, gnl|bosTau2|chrX (10047601-10047880) | |
| 369-648, gnl|Hg17|chr12 (23578724-23578445) | |
| 369-648, gnl|Mm7|chr6 (143924236-143923957) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-153, gnl|bosTau2|chrX (10038553-10038705) | |
| 1-153, gnl|canFam2|chr27 (26858286-26858113) | |
| 1-153, gnl|canFam2|chr27 (26858290-26858098) | |
| 1-153, gnl|danRer3|chr4 (18550632-18550802) | |
| 1-153, gnl|danRer3|chr4 (18550625-18550818) | |
| 1-153, gnl|dasNov1|scaffold_3991 (73512-73339) | |
| 1-153, gnl|dasNov1|scaffold_3991 (73516-73324) | |
| 1-153, gnl|echTel1|scaffold_219718 (9075-9244) | |
| 1-153, gnl|echTel1|scaffold_219718 (9067-9259) | |
| 1-153, gnl|fr1|chrUn (158297282-158297122) | |
| 1-153, gnl|fr1|chrUn (158297288-158297098) | |
| 1-153, gnl|galGal2|chr1 (62767977-62767804) | |
| 1-153, gnl|galGal2|chr1 (62767981-62767787) | |
| 1-153, gnl|hg17|chr12 (23587408-23587600) | |
| 1-153, gnl|Hg17|chr12 (23587563-23587411) | |
| 1-153, gnl|hg17|chr8 (88870420-88870593) | |
| 1-153, gnl|loxAfr1|scaffold_16148 (9972-10141) | |
| 1-153, gnl|loxAfr1|scaffold_16148 (9964-10156) | |
| 1-153, gnl|mm7|chr6 (143931842-143932015) | |
| 1-153, gnl|mm7|chr6 (143931838-143932030) | |
| 1-153, gnl|Mm7|chr6 (143931993-143931841) | |
| 1-153, gnl|monDom2|scaffold_31 (2419398-2419226) | |
| 1-153, gnl|monDom2|scaffold_31 (2419403-2419210) | |
| 1-153, gnl|oryCun1|scaffold_198203 (12230-12402) | |
| 1-153, gnl|oryCun1|scaffold_198203 (12226-12418) | |
| 1-153, gnl|panTro1|chr7 (91048424-91048597) | |
| 1-153, gnl|panTro1|chrUn_random (49970335-49970527) | |
| 1-153, gnl|rheMac2|chr11 (23809931-23810104) | |
| 1-153, gnl|rheMac2|chr11 (23809927-23810119) | |
| 1-153, gnl|rn3|chr4 (180652188-180652361) | |
| 1-153, gnl|rn3|chr4 (180652184-180652376) | |
| 1-153, gnl|tetNig1|chrUn_random (55420560-55420400) | |
| 1-153, gnl|tetNig1|chrUn_random (55420566-55420400) | |
| 1-153, gnl|xenTro1|scaffold_1124 (165627-165454) | |
| 1-153, gnl|xenTro1|scaffold_1124 (165631-165439) | |
| 369-648, gnl|bosTau2|chrX (10047601-10047880) | |
| 369-648, gnl|Hg17|chr12 (23578724-23578445) | |
| 369-648, gnl|Mm7|chr6 (143924236-143923957) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| ski (0.146735) |