Non-Coding RNA Search

Ss1.1-rski0130_k22.5

Sequence:


               
               TGATTTTTTTCTCCTTTTGCAATTGAATTAAATACATTTTTCATGCATGTTTTCCAGAAA
ATAGAAGTGAGTATTAATGTTATTAAAAAGATTATTTTTTTTATTAAAGGCTATTTATAT
TATAGAAACTATCATTAATATATATTCTTTATTTACATGACCTGTCCCATTATCATGCAT
TGTTTTGCACCCCAAATTTTTTATTGTTTGTAGCAGCATGGTCAGCTTTTCTCTTGATCT
GTGGGTGAGGCTCAGGCACTATCCCATTTACGCCAATGACTAGTGTATAACTACTTAAGG
AAAAGAGATAAAAGTTCCTCCTTTTTCCTTCTATTTCCTTCTGTTTTCACTTGAATCCTC
CATCCTCCATTCTCTTTTATAGTTGAGAATGCCTCAATCATATGAAATTAGTTACCAAAA
TTAACACGTTTTAGACTATCTTCCTGATTGCTTAACCTCTCTACCGAGGTATGCTCATGA
ATAACACTTTATAACATGGGGGAATAAAAACCATGAACTTTTTACCTTTCTAGGCTATTT
ATTCAATATCTCAATACTAAAAGTAGGACCTTAAACCATTTTAAGATCATGTCCCATTTC
CGAGTGGTCAGGGCTCACTCTCCGGCTCTATTAAATTGTATTTGAGTACAGGATACATTC
TTAAACATTTTGAAAGACATTAACCCAAGATGTAGGGGCTACAGCTAGTTAACCCTCTAC
AATCTGATAGTTTACTCAGTATTTGAAATGAATGATTAATGCCCTAGGAAATAGCTTTAG
CAAATATGCAGGTGCCACACCAGAAAAAGTGCAATAATTTACTGACAGTTTTCTAGATTA
GGCATATTATTGGAACAACTTTATGAAGAGTGCATACTGTATACAGCATCACCTTAAAAA
TATTCATTTATGAAATCAGTTACATATAGTAGAAGTCTTGAATAGTGAACAGGGACTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGATTTTTTTCTCCTTTTGCAATTGAATTAAATACATTTTTCATGCATGTTTTCCAGAAA
ATAGAAGTGAGTATTAATGTTATTAAAAAGATTATTTTTTTTATTAAAGGCTATTTATAT
TATAGAAACTATCATTAATATATATTCTTTATTTACATGACCTGTCCCATTATCATGCAT
TGTTTTGCACCCCAAATTTTTTATTGTTTGTAGCAGCATGGTCAGCTTTTCTCTTGATCT
GTGGGTGAGGCTCAGGCACTATCCCATTTACGCCAATGACTAGTGTATAACTACTTAAGG
AAAAGAGATAAAAGTTCCTCCTTTTTCCTTCTATTTCCTTCTGTTTTCACTTGAATCCTC
CATCCTCCATTCTCTTTTATAGTTGAGAATGCCTCAATCATATGAAATTAGTTACCAAAA
TTAACACGTTTTAGACTATCTTCCTGATTGCTTAACCTCTCTACCGAGGTATGCTCATGA
ATAACACTTTATAACATGGGGGAATAAAAACCATGAACTTTTTACCTTTCTAGGCTATTT
ATTCAATATCTCAATACTAAAAGTAGGACCTTAAACCATTTTAAGATCATGTCCCATTTC
CGAGTGGTCAGGGCTCACTCTCCGGCTCTATTAAATTGTATTTGAGTACAGGATACATTC
TTAAACATTTTGAAAGACATTAACCCAAGATGTAGGGGCTACAGCTAGTTAACCCTCTAC
AATCTGATAGTTTACTCAGTATTTGAAATGAATGATTAATGCCCTAGGAAATAGCTTTAG
CAAATATGCAGGTGCCACACCAGAAAAAGTGCAATAATTTACTGACAGTTTTCTAGATTA
GGCATATTATTGGAACAACTTTATGAAGAGTGCATACTGTATACAGCATCACCTTAAAAA
TATTCATTTATGAAATCAGTTACATATAGTAGAAGTCTTGAATAGTGAACAGGGACTCTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-960, gnl|bosTau2|chr1 (57191557-57192498)
               

               
               4-960, gnl|Hg17|chr3 (180435695-180436643)
               

               
               4-960, gnl|Mm7|chr3 (32272415-32273410)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-960, gnl|bosTau2|chr1 (57191557-57192498)
               

               
               4-960, gnl|Hg17|chr3 (180435695-180436643)
               

               
               4-960, gnl|Mm7|chr3 (32272415-32273410)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ski (0.146735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)

	4-960, gnl\|bosTau2\|chr1 (57191557-57192498)
	4-960, gnl\|Hg17\|chr3 (180435695-180436643)
	4-960, gnl\|Mm7\|chr3 (32272415-32273410)