Non-Coding RNA Search

Ss1.1-rski0134_e17.5

Sequence:


               
               GGATGTTCCTCTTTTTTGGGGAATGGTGGAGGGATAATCAATCATATATTAACAGGATAA
CAGATGAAAATGAACAAGTCAGAGAGTAAAGGCCTGTTCCCCTAATCTCGGCAGGGCAAG
GCATAGAGCAGAGGGCACAGAGAAAAGGGGCATCCAGGCTTAATTCTAGATATTTTCGAA
GCAATGTCTGTCTTCAGAAAACATGTATCATTTACTCCTTTCTGTCTCTTAGATGTAGAA
GGGCTATCGATCACATACATACATACATTTAAAAAATACACCCTTGGAAAATTCTTTTTA
AAATCAAATTTAAGCACTTCATTCTGTGTTACATATTTCCTGAGTCACTGGTCATTATTT
TAGGGACCTATGAAGTTAATGTCACAGTCCTTTTGCTTTGTTTTTCTCTGTCCCTCTTAC
TTTTAACAAAATAGAACTGTGATGTGTCTTCTTTGTAAAAGTTTAGGTATAAAATGCTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATGTTCCTCTTTTTTGGGGAATGGTGGAGGGATAATCAATCATATATTAACAGGATAA
CAGATGAAAATGAACAAGTCAGAGAGTAAAGGCCTGTTCCCCTAATCTCGGCAGGGCAAG
GCATAGAGCAGAGGGCACAGAGAAAAGGGGCATCCAGGCTTAATTCTAGATATTTTCGAA
GCAATGTCTGTCTTCAGAAAACATGTATCATTTACTCCTTTCTGTCTCTTAGATGTAGAA
GGGCTATCGATCACATACATACATACATTTAAAAAATACACCCTTGGAAAATTCTTTTTA
AAATCAAATTTAAGCACTTCATTCTGTGTTACATATTTCCTGAGTCACTGGTCATTATTT
TAGGGACCTATGAAGTTAATGTCACAGTCCTTTTGCTTTGTTTTTCTCTGTCCCTCTTAC
TTTTAACAAAATAGAACTGTGATGTGTCTTCTTTGTAAAAGTTTAGGTATAAAATGCTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr10 (65401015-65400536)
               

               
               1-480, gnl|Hg17|chr14 (85161030-85161470)
               

               
               1-480, gnl|Mm7|chr12 (93259855-93260313)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr10 (65401015-65400536)
               

               
               1-480, gnl|Hg17|chr14 (85161030-85161470)
               

               
               1-480, gnl|Mm7|chr12 (93259855-93260313)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               ski (0.146735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               ski (0.146735)

	1-480, gnl\|bosTau2\|chr10 (65401015-65400536)
	1-480, gnl\|Hg17\|chr14 (85161030-85161470)
	1-480, gnl\|Mm7\|chr12 (93259855-93260313)