Non-Coding RNA Search

Ss1.1-rski0134_g22.5

Sequence:


               
               GTGTCACACACCAGATTAGCAGTAGCACGTCTGAACTGAATTCTTTCATCCTCACACTAC
TGCCATCTGAGGGAAAAGGGATTTTTTTCTAGCAATTTACTTTTATACACCTAGAAGTAC
TAAGAAGTTTAAAAATGAACACACAGATATTTAAATGTTAGACATTTACGTTTGTGGTAA
AAGAGTCAAGTTTCTATGTAAGAGTGAGGTGCACAGTGGGGAACCAAAATTAAATAACAA
TACGACCATGCTCCTCTGATGTAATTTCTAAAAAGTTTATGAAGGGCTTAATTACCTTGA
CTTGTTTGGAGAGACTTAAGCCATGGGAGTAGAGAATATCATTTAACACGGAGATAGAAA
AATTTTCCATAGCCACTATATAACTTCTCATTTTCAGGTTGATTTGGCATAATATAGGTT
ATCTTCTGCCACTAACTCGAAAATAAAAATTTTAAAAGAAAGTCATGTCCTAGATACTGA
AAGACATCAACAAGAATATTTCGGGGTTAACTATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTCACACACCAGATTAGCAGTAGCACGTCTGAACTGAATTCTTTCATCCTCACACTAC
TGCCATCTGAGGGAAAAGGGATTTTTTTCTAGCAATTTACTTTTATACACCTAGAAGTAC
TAAGAAGTTTAAAAATGAACACACAGATATTTAAATGTTAGACATTTACGTTTGTGGTAA
AAGAGTCAAGTTTCTATGTAAGAGTGAGGTGCACAGTGGGGAACCAAAATTAAATAACAA
TACGACCATGCTCCTCTGATGTAATTTCTAAAAAGTTTATGAAGGGCTTAATTACCTTGA
CTTGTTTGGAGAGACTTAAGCCATGGGAGTAGAGAATATCATTTAACACGGAGATAGAAA
AATTTTCCATAGCCACTATATAACTTCTCATTTTCAGGTTGATTTGGCATAATATAGGTT
ATCTTCTGCCACTAACTCGAAAATAAAAATTTTAAAAGAAAGTCATGTCCTAGATACTGA
AAGACATCAACAAGAATATTTCGGGGTTAACTATTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-227, gnl|bosTau2|chr5 (18590355-18590139)
               

               
               11-227, gnl|Hg17|chr12 (49651576-49651385)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-227, gnl|bosTau2|chr5 (18590355-18590139)
               

               
               11-227, gnl|Hg17|chr12 (49651576-49651385)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               gul (0.177588)
               

               
               ski (0.146735)
               

               
               kid (0.129735)
               

               
               jca (0.11396)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               ski (0.146735)
               

               
               kid (0.129735)
               

               
               jca (0.11396)

	11-227, gnl\|bosTau2\|chr5 (18590355-18590139)
	11-227, gnl\|Hg17\|chr12 (49651576-49651385)