Non-Coding RNA Search

Ss1.1-rski0135_g24.5

Sequence:


               
               GAAACCCTATGCCTGCAGTGAGTGTGGGAAAGCCTTCACTACAAGGACAATGCTCATTGT
GCATCAAAGAACCCACACAGGAGAGAGACCCTATGGATGCCATGAGTGTGGGAAAGCCTT
CTCTCACATGTCATGCCTGGTTAAACATAAGAAGATACACACAAGAGAGAAACAAGTAGA
TTCAGTGAAGATGGACTCTCCTTCCACAGCCGGTCACAGCTTATTAGATACTAGTGAACT
CGTGCAGGGGAAAAAACCTGTTAACATGGTGTCTGGACAAATGCTTTCTATGATCCCTCA
GACATCATTAAACATCAGTAGGCTCCTAGCAGATAGGAATGTGGTCCTTACAGAAGAGCC
AGTTGCCAGATGTGCACCCTTGAGAGATAACAGGGAGTTTGTGCAGGAAAGAAACCTTAT
GAATGCAGTGAATGTGGTTATGCCTTCAATGGTCAATTACATCTTATTTTACGTCACAAA
AAACACATAGGAAAATACTGGTACCTTCTATTTGGAAAAACCTTGGGTAATAATGTACAG
CTGATTGTTTGGTTATGTATAAATGGAAGGCTTTGTTTAGGAAGACAGACCATCAGTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAACCCTATGCCTGCAGTGAGTGTGGGAAAGCCTTCACTACAAGGACAATGCTCATTGT
GCATCAAAGAACCCACACAGGAGAGAGACCCTATGGATGCCATGAGTGTGGGAAAGCCTT
CTCTCACATGTCATGCCTGGTTAAACATAAGAAGATACACACAAGAGAGAAACAAGTAGA
TTCAGTGAAGATGGACTCTCCTTCCACAGCCGGTCACAGCTTATTAGATACTAGTGAACT
CGTGCAGGGGAAAAAACCTGTTAACATGGTGTCTGGACAAATGCTTTCTATGATCCCTCA
GACATCATTAAACATCAGTAGGCTCCTAGCAGATAGGAATGTGGTCCTTACAGAAGAGCC
AGTTGCCAGATGTGCACCCTTGAGAGATAACAGGGAGTTTGTGCAGGAAAGAAACCTTAT
GAATGCAGTGAATGTGGTTATGCCTTCAATGGTCAATTACATCTTATTTTACGTCACAAA
AAACACATAGGAAAATACTGGTACCTTCTATTTGGAAAAACCTTGGGTAATAATGTACAG
CTGATTGTTTGGTTATGTATAAATGGAAGGCTTTGTTTAGGAAGACAGACCATCAGTGAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-492, gnl|bosTau2|chr17 (22552175-22551675)
               

               
               2-492, gnl|Mm7|chr5 (109295197-109295640)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-492, gnl|bosTau2|chr17 (22552175-22551675)
               

               
               2-492, gnl|Mm7|chr5 (109295197-109295640)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               fcc (0.197785)
               

               
               sin (0.174948)
               

               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               lyg (0.133103)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               sin (0.174948)
               

               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               lyg (0.133103)

	2-492, gnl\|bosTau2\|chr17 (22552175-22551675)
	2-492, gnl\|Mm7\|chr5 (109295197-109295640)

	fcc (0.197785)
	sin (0.174948)
	rec (0.17307)
	ski (0.146735)
	lyg (0.133103)