Ss1.1-rski0135_p18.5
|
CTCTTAACGTCCGGGCAAAAGCAGCCTGGTCCCTGGGCAACCTGACGGACACTCTGATTG
TCAACATGGAAACACCAGACCCAAGTTTCCAAGAAGAGTTTTCTGGCCTCCTGCTCTTGA
AGATGCTGCAATCGGCTATAGAGGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGCCG
TCCGGGCCCTTGGAAATTTGCTTCATTTCCTGCAACCGTCTCATATAGAAAAACCCAGAT
TTGCTGAAATTATTGAGGAGGCCATCCAGGCCCTAATTTCTACCATTCTAATTGAGGCTG
CCATGAAAGTCCGATGGAATGCTTGTTATGCAGTGGGAAACGTATTTAAAAATCCCGCCC
TTCCCTTAGGCACAGCACCATGGACCTCCCAGGCCTACAATGCCCTGACATCAGTTGTGA
CCTCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCTGCTGCCCTTTCCATCCCAGGCA
AGCGAGAGCACTATGGCTCTGTTGACCAGTATGCTCAGATCTGGAACGCATTGGTCACTG
CTTTACAGAAGAGCGAAGATACCACAGACTTTTTGGAATTCAAGTACTGTGCCAGCCTAC
GGACCCAAATCTGCCAGGCGCTGCTTCACCTCTTGAGCGTGGCCAGCGCCTCAGACTTGT
CCTGCATCAAAGAAACCCTTGAATTGAATGGGGACATGGTCCAGTCCTATATCCTACAGT
TTTTAAAATCAGGAACAGAGAGAGATGACACCGGAGCACCCCCCAGCCCGCAGGAAAGAG
ACCAGATGGTCAGAACAGCCCTGGAGCACATCAGCAGTGTCCAGGCACTGGCTGGCGATA
CATCCAAAAGGGCCATCATGGGCTTTTTAGAAGATATCCTGACCGTTTATTTTGACTCAT
CTGGATCACAAGTAGCACTCCTAGGATTAACAAGTCGGTGAATATTCCACCAGGCTTTCC
AGGTGTCACGTGGTAACAGGAAGACCTGAGCTTAAGCAGCAGATGTATGGGATTTAATCT
TAGGGGTGGAAACAGTCCAGCCACTGACTTTTTAGAATGAGTTAGCTGCTATTTAAATTT
TTCTCAAGGGCTCAGTTGCTTTAGAGAGCGGTGTCGCCGCATTGGCCGTGATCATGGTTG
TTGGAACCTCTGACCTGTGCAACCAGGAACCAGGGAGTTGGGTTGTCGCGTGGGCCGAGC
AGACTGGAGGTTTGTGAAGGGTGTTTGGTCTCAGAAGAGTTTTCTTTTTAAAAGCAAAAG
GATTTAGGAATTAGAATGTTGTATATTGTATCGCTGGGAATTGTTTTTCTTTTATAATAA
ACTAATGTAAAGCAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCTTAACGTCCGGGCAAAAGCAGCCTGGTCCCTGGGCAACCTGACGGACACTCTGATTG
TCAACATGGAAACACCAGACCCAAGTTTCCAAGAAGAGTTTTCTGGCCTCCTGCTCTTGA
AGATGCTGCAATCGGCTATAGAGGCATCCAAGGATAAAGACAAGGTAAAAAGCAATGCCG
TCCGGGCCCTTGGAAATTTGCTTCATTTCCTGCAACCGTCTCATATAGAAAAACCCAGAT
TTGCTGAAATTATTGAGGAGGCCATCCAGGCCCTAATTTCTACCATTCTAATTGAGGCTG
CCATGAAAGTCCGATGGAATGCTTGTTATGCAGTGGGAAACGTATTTAAAAATCCCGCCC
TTCCCTTAGGCACAGCACCATGGACCTCCCAGGCCTACAATGCCCTGACATCAGTTGTGA
CCTCATGCAAGAACTTCAAAGTGCGCATCAGATCTGCTGCTGCCCTTTCCATCCCAGGCA
AGCGAGAGCACTATGGCTCTGTTGACCAGTATGCTCAGATCTGGAACGCATTGGTCACTG
CTTTACAGAAGAGCGAAGATACCACAGACTTTTTGGAATTCAAGTACTGTGCCAGCCTAC
GGACCCAAATCTGCCAGGCGCTGCTTCACCTCTTGAGCGTGGCCAGCGCCTCAGACTTGT
CCTGCATCAAAGAAACCCTTGAATTGAATGGGGACATGGTCCAGTCCTATATCCTACAGT
TTTTAAAATCAGGAACAGAGAGAGATGACACCGGAGCACCCCCCAGCCCGCAGGAAAGAG
ACCAGATGGTCAGAACAGCCCTGGAGCACATCAGCAGTGTCCAGGCACTGGCTGGCGATA
CATCCAAAAGGGCCATCATGGGCTTTTTAGAAGATATCCTGACCGTTTATTTTGACTCAT
CTGGATCACAAGTAGCACTCCTAGGATTAACAAGTCGGTGAATATTCCACCAGGCTTTCC
AGGTGTCACGTGGTAACAGGAAGACCTGAGCTTAAGCAGCAGATGTATGGGATTTAATCT
TAGGGGTGGAAACAGTCCAGCCACTGACTTTTTAGAATGAGTTAGCTGCTATTTAAATTT
TTCTCAAGGGCTCAGTTGCTTTAGAGAGCGGTGTCGCCGCATTGGCCGTGATCATGGTTG
TTGGAACCTCTGACCTGTGCAACCAGGAACCAGGGAGTTGGGTTGTCGCGTGGGCCGAGC
AGACTGGAGGTTTGTGAAGGGTGTTTGGTCTCAGAAGAGTTTTCTTTTTAAAAGCAAAAG
GATTTAGGAATTAGAATGTTGTATATTGTATCGCTGGGAATTGTTTTTCTTTTATAATAA
ACTAATGTAAAGCAAAAAAAAAAAAAAAAAAAAAAA
|
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163-370, gnl|bosTau2|chr19 (6725152-6725359) |
|
163-370, gnl|canFam2|chr9 (40901544-40901772) |
|
163-370, gnl|danRer3|chr21 (35971782-35972009) |
|
163-370, gnl|dasNov1|scaffold_276 (150868-151096) |
|
163-370, gnl|echTel1|scaffold_286793 (43117-42894) |
|
163-370, gnl|fr1|chrUn (206434429-206434210) |
|
163-370, gnl|galGal2|chr19 (8215272-8215499) |
|
163-370, gnl|hg17|chr17 (55478156-55478383) |
|
163-370, gnl|Hg17|chr17 (55478374-55478167) |
|
163-370, gnl|loxAfr1|scaffold_16747 (36384-36611) |
|
163-370, gnl|mm7|chr11 (83849524-83849296) |
|
163-370, gnl|Mm7|chr11 (83849304-83849511) |
|
163-370, gnl|monDom2|scaffold_44 (6786681-6786911) |
|
163-370, gnl|oryCun1|scaffold_193107 (50254-50028) |
|
163-370, gnl|panTro1|chr19_random (41229786-41230013) |
|
163-370, gnl|rn3|chr10 (72017718-72017490) |
|
163-370, gnl|tetNig1|chr7 (3742558-3742760) |
|
163-370, gnl|xenTro1|scaffold_566 (566337-566118) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
163-370, gnl|bosTau2|chr19 (6725152-6725359) |
|
163-370, gnl|canFam2|chr9 (40901544-40901772) |
|
163-370, gnl|danRer3|chr21 (35971782-35972009) |
|
163-370, gnl|dasNov1|scaffold_276 (150868-151096) |
|
163-370, gnl|echTel1|scaffold_286793 (43117-42894) |
|
163-370, gnl|fr1|chrUn (206434429-206434210) |
|
163-370, gnl|galGal2|chr19 (8215272-8215499) |
|
163-370, gnl|hg17|chr17 (55478156-55478383) |
|
163-370, gnl|Hg17|chr17 (55478374-55478167) |
|
163-370, gnl|loxAfr1|scaffold_16747 (36384-36611) |
|
163-370, gnl|mm7|chr11 (83849524-83849296) |
|
163-370, gnl|Mm7|chr11 (83849304-83849511) |
|
163-370, gnl|monDom2|scaffold_44 (6786681-6786911) |
|
163-370, gnl|oryCun1|scaffold_193107 (50254-50028) |
|
163-370, gnl|panTro1|chr19_random (41229786-41230013) |
|
163-370, gnl|rn3|chr10 (72017718-72017490) |
|
163-370, gnl|tetNig1|chr7 (3742558-3742760) |
|
163-370, gnl|xenTro1|scaffold_566 (566337-566118) |
|
cmu (0.55918) |
|
sto (0.359648) |
|
cje (0.330469) |
|
csk (0.281492) |
|
tes (0.207814) |
|
duo (0.172801) |
|
ski (0.146735) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
nmm (0.132802) |
|
thg (0.126791) |
|
eep (0.122564) |
|
cmu (0.55918) |
|
sto (0.359648) |
|
cje (0.330469) |
|
csk (0.281492) |
|
tes (0.207814) |
|
duo (0.172801) |
|
ski (0.146735) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
nmm (0.132802) |
|
thg (0.126791) |
|
eep (0.122564) |
