Non-Coding RNA Search

Ss1.1-rsme001_p23.5

Sequence:


               
               AGTTTATTGAGAAATTGTGTTTCATAAATGGATTTCCCTACTATGACTGTGAAAACATAT
CAAGTGCCACTTTAGTGTCACAGACAGAAAGCACACACCTATGCAATATGGCTTACCCTA
------------AAAACCCAAGCATAGTTTAAAAGTATATGTCAATAATATTAGTCTTGA
GTTTCTTAGAGAGTTGTTTATGATTTCTCCAGGATAAGTGTATAAAAGAGATTGTTTTTC
TTTCATCACTTGATTATTTTCTTTAAAATCAGCTATTACAGGATATTTTTTTATTTTATA
CATGCTGTTTTTTTAATTAAAATATAATCACTGAGAACTGAAGTTTACTAATTTTGATTT
TATACAGTTTGTAGCGTACAGAATAAACTGGGATTTATAAACCAGCTGTGATTAACAATG
TAAAGTATTAATTATTGAACTTGAACCAGATTTTTAGGAAAATTGTTATTTCTTTTTCCC
CTTTATGATCTTAACTAATTTGAATCCTTTAAGACGGATTTTTCCATACTATTTTTTGAG
ATAGTAGATAACTGGGGGGAAGAATGCATGTATGATACTCCATAAATTCAACGTTCTTTA
AGAAATAAATTACAAACAAGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTTATTGAGAAATTGTGTTTCATAAATGGATTTCCCTACTATGACTGTGAAAACATAT
CAAGTGCCACTTTAGTGTCACAGACAGAAAGCACACACCTATGCAATATGGCTTACCCTA
------------AAAACCCAAGCATAGTTTAAAAGTATATGTCAATAATATTAGTCTTGA
GTTTCTTAGAGAGTTGTTTATGATTTCTCCAGGATAAGTGTATAAAAGAGATTGTTTTTC
TTTCATCACTTGATTATTTTCTTTAAAATCAGCTATTACAGGATATTTTTTTATTTTATA
CATGCTGTTTTTTTAATTAAAATATAATCACTGAGAACTGAAGTTTACTAATTTTGATTT
TATACAGTTTGTAGCGTACAGAATAAACTGGGATTTATAAACCAGCTGTGATTAACAATG
TAAAGTATTAATTATTGAACTTGAACCAGATTTTTAGGAAAATTGTTATTTCTTTTTCCC
CTTTATGATCTTAACTAATTTGAATCCTTTAAGACGGATTTTTCCATACTATTTTTTGAG
ATAGTAGATAACTGGGGGGAAGAATGCATGTATGATACTCCATAAATTCAACGTTCTTTA
AGAAATAAATTACAAACAAGCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-546, gnl|bosTau2|chr19 (5141521-5142069)
               

               
               1-546, gnl|Hg17|chr17 (55381338-55381897)
               

               
               1-546, gnl|Mm7|chr11 (86570122-86569583)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-546, gnl|bosTau2|chr19 (5141521-5142069)
               

               
               1-546, gnl|Hg17|chr17 (55381338-55381897)
               

               
               1-546, gnl|Mm7|chr11 (86570122-86569583)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               sme (0.305437)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)

	1-546, gnl\|bosTau2\|chr19 (5141521-5142069)
	1-546, gnl\|Hg17\|chr17 (55381338-55381897)
	1-546, gnl\|Mm7\|chr11 (86570122-86569583)