Non-Coding RNA Search

Ss1.1-rsme005_b19.5

Sequence:


               
               TACTGAGAAACCCTTTTCATAGAGGAAACTAAGGGGAAGACCAAAATTAGTAATAAAATG
GTATGATCAGTATTAAAACCTATCATTCATTTGTTGATTTTATTAAAAATTACTTTAAAA
AATAAAGATAGTAATGAATTTAGGCATAGACTAACTTTTGCTAAAAGCAGAAACAACACT
GACTTTGTTGCCTAGAGAAAAATAACTTCTCAGGTATTTGGATTCCAATCCTACATTATA
TCCGTTCTTTTTGCACAACTAAACTCTAAGAAAGACCATTGCCGTTTACAATGCCTTGTG
CAGCCTTAGATTCTAATGTTCTTTCAACATTGTTACATCTCCTTATGACCTTGGTCCTCA
GTCAGAAATCCCTTATTAAAAGTACCTTTCCTTCTCCCTGACCAAAGGCACATTCCCTCA
GTTCCGCAGCGTTGCTGCTGGTCCCTTCCAGACTGGCCTTGTCCTGAGGTTGGTGCCCTC
AGCTGAGTACAGCCTGAGCTGTGGGAAGAGCTGAGACAGTGGATAAGCTTCTGGAGAAAG
GGCCACCTGTGGAGTCGACCTGACCTCTTAAGACAGAACTCTCCAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACTGAGAAACCCTTTTCATAGAGGAAACTAAGGGGAAGACCAAAATTAGTAATAAAATG
GTATGATCAGTATTAAAACCTATCATTCATTTGTTGATTTTATTAAAAATTACTTTAAAA
AATAAAGATAGTAATGAATTTAGGCATAGACTAACTTTTGCTAAAAGCAGAAACAACACT
GACTTTGTTGCCTAGAGAAAAATAACTTCTCAGGTATTTGGATTCCAATCCTACATTATA
TCCGTTCTTTTTGCACAACTAAACTCTAAGAAAGACCATTGCCGTTTACAATGCCTTGTG
CAGCCTTAGATTCTAATGTTCTTTCAACATTGTTACATCTCCTTATGACCTTGGTCCTCA
GTCAGAAATCCCTTATTAAAAGTACCTTTCCTTCTCCCTGACCAAAGGCACATTCCCTCA
GTTCCGCAGCGTTGCTGCTGGTCCCTTCCAGACTGGCCTTGTCCTGAGGTTGGTGCCCTC
AGCTGAGTACAGCCTGAGCTGTGGGAAGAGCTGAGACAGTGGATAAGCTTCTGGAGAAAG
GGCCACCTGTGGAGTCGACCTGACCTCTTAAGACAGAACTCTCCAGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-588, gnl|bosTau2|chr9 (10117841-10117255)
               

               
               2-588, gnl|Hg17|chr6 (83978099-83977481)
               

               
               2-588, gnl|Mm7|chr9 (86685832-86685280)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-588, gnl|bosTau2|chr9 (10117841-10117255)
               

               
               2-588, gnl|Hg17|chr6 (83978099-83977481)
               

               
               2-588, gnl|Mm7|chr9 (86685832-86685280)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sme (0.305437)
               

               
               hyp (0.142837)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               hyp (0.142837)

	2-588, gnl\|bosTau2\|chr9 (10117841-10117255)
	2-588, gnl\|Hg17\|chr6 (83978099-83977481)
	2-588, gnl\|Mm7\|chr9 (86685832-86685280)