Non-Coding RNA Search

Ss1.1-rsme005_o17.5

Sequence:


               
               AGTAGCCCTTCTAAGTCTATAGTGATGTCTCGTAATACTATTTTCCACCTTCCTGATGAC
TAGTGAGGTTGAACCTCTTTTCACTTATTGGCTTCTTTTATGACATGCCTGTTCAAGTAG
TTGGGTCCAACTTTATTCTTCTTCTAGATAGTTATCACTGTTCTGCACTATTTGCACTTT
CCTATACACTTTAAAAACAACGAATCAGCCTCTGTCCCCTCAAAGTTTCAAGGTTTGATT
AGCCCTTCACAGAATCTGTATGTCAATGTGGGGAGAACTTATAAATTCAATATAATGTCA
AGTCATCCATTCCATGAACATGGTAATATCTCACTTTTGTGTAGGATTTCTTTTATTTCT
CTCAATATTTTATAGTTTTCTATGTGGAATCCTTTAACATCTTTCACATGATTTATTTCT
AGGTATCTGATGTGGTTTATGTTATTGTAAGTAGCATTATCTTTTACATTTTAATTTGCT
AATTGTTAGAGGTAATAGAAACACGATTTTTATCAAGTGACTTTGTGTCTAAATTCACTT
GTTATTTCTAAGAGTTAATCTGTAGATGTATACATATACAGTCCTGTTGTATAAATAATT
GGAGAGTTTTATTTCTCGATTTTTTTTTTATACCATACCGGCAGCCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTAGCCCTTCTAAGTCTATAGTGATGTCTCGTAATACTATTTTCCACCTTCCTGATGAC
TAGTGAGGTTGAACCTCTTTTCACTTATTGGCTTCTTTTATGACATGCCTGTTCAAGTAG
TTGGGTCCAACTTTATTCTTCTTCTAGATAGTTATCACTGTTCTGCACTATTTGCACTTT
CCTATACACTTTAAAAACAACGAATCAGCCTCTGTCCCCTCAAAGTTTCAAGGTTTGATT
AGCCCTTCACAGAATCTGTATGTCAATGTGGGGAGAACTTATAAATTCAATATAATGTCA
AGTCATCCATTCCATGAACATGGTAATATCTCACTTTTGTGTAGGATTTCTTTTATTTCT
CTCAATATTTTATAGTTTTCTATGTGGAATCCTTTAACATCTTTCACATGATTTATTTCT
AGGTATCTGATGTGGTTTATGTTATTGTAAGTAGCATTATCTTTTACATTTTAATTTGCT
AATTGTTAGAGGTAATAGAAACACGATTTTTATCAAGTGACTTTGTGTCTAAATTCACTT
GTTATTTCTAAGAGTTAATCTGTAGATGTATACATATACAGTCCTGTTGTATAAATAATT
GGAGAGTTTTATTTCTCGATTTTTTTTTTATACCATACCGGCAGCCTG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               179-623, gnl|bosTau2|chr19 (9062432-9061984)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               179-623, gnl|bosTau2|chr19 (9062432-9061984)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               sme (0.305437)
               

               
               duo (0.172801)
               

               
               ski (0.146735)
               

               
               ova (0.129132)
               

               
               jca (0.11396)
               

               
               nbm (0.0993246)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               duo (0.172801)
               

               
               ski (0.146735)
               

               
               ova (0.129132)
               

               
               jca (0.11396)
               

               
               nbm (0.0993246)

	sme (0.305437)
	duo (0.172801)
	ski (0.146735)
	ova (0.129132)
	jca (0.11396)
	nbm (0.0993246)