Ss1.1-rsme005_p20.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
CACAAATACAACTCATTGGAGCCATCCTCTTGAGCGAGAAGGACTTCCTCCAGGATGGGA GCGAGTTGAGTCATCAGAATTTGGAACCTATTATGTAGATCACACAAATAAAAAGGCTCA ATATAGGCATCCCTGTGCTCCTAGCGTACCTCGATATGATCAACCTCCTCCTGTTACATA CCAGCCACAGCAAACTGAAAGAAATCAGTCCCTTCTGGTACCTGCAAATCCGTATCATGC TGCAGAAATTCCTGACTGGCTTCAGGTTTATGCTCGAGCCCCTGTGAAATATGACCACAT TCTCAAGTGGGAACTCTTCCAGCTGGCTGACCTGGATACATACCAGGGAATGCTGAAGTT GCTTTTCATGAAAGAACTGGAACAGATTGTTAAAATGTATGAAGCCTACAGACAGGCTCT TCTCACAGAGTTGGAAAATCGCAAGCAGAGACAACAGTGGTATGCCCAGCAACATGGCAA GAATTTTTAAGTTAATTTTTATAAATAAAATTTAAGGGCTTTAAAATCTTTTCACAAATG AAAAACTGCAAACAAGTACTTGGGTTAAAAAGGCAGCTTACTTTTTTGGACATCATAAAT CTAATTTTACATATATTTTGTTATTAAAAATATTCTTTTATTAAGAAAAAAGTGAGTTTA TCATTTTAAGAGCCAACCTGGCAAACACTTCTAAATGCTGTATATTTGGAAACTGCTTTG AATATTCTTGATGGCAACAAATGTAGCAAGAAATGTCATTTAACCAGATATTAAGTAGGA AATTATCAGTCAGTAAACTCTTATAGTAGCAGTACCTTTCTTTAAAAAGCAGAGAGGGAG TTCCCATTGTGGCGCAGGGGTTAACGAATCTGAGTAGGAACCATGAGG |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
CACAAATACAACTCATTGGAGCCATCCTCTTGAGCGAGAAGGACTTCCTCCAGGATGGGA GCGAGTTGAGTCATCAGAATTTGGAACCTATTATGTAGATCACACAAATAAAAAGGCTCA ATATAGGCATCCCTGTGCTCCTAGCGTACCTCGATATGATCAACCTCCTCCTGTTACATA CCAGCCACAGCAAACTGAAAGAAATCAGTCCCTTCTGGTACCTGCAAATCCGTATCATGC TGCAGAAATTCCTGACTGGCTTCAGGTTTATGCTCGAGCCCCTGTGAAATATGACCACAT TCTCAAGTGGGAACTCTTCCAGCTGGCTGACCTGGATACATACCAGGGAATGCTGAAGTT GCTTTTCATGAAAGAACTGGAACAGATTGTTAAAATGTATGAAGCCTACAGACAGGCTCT TCTCACAGAGTTGGAAAATCGCAAGCAGAGACAACAGTGGTATGCCCAGCAACATGGCAA GAATTTTTAAGTTAATTTTTATAAATAAAATTTAAGGGCTTTAAAATCTTTTCACAAATG AAAAACTGCAAACAAGTACTTGGGTTAAAAAGGCAGCTTACTTTTTTGGACATCATAAAT CTAATTTTACATATATTTTGTTATTAAAAATATTCTTTTATTAAGAAAAAAGTGAGTTTA TCATTTTAAGAGCCAACCTGGCAAACACTTCTAAATGCTGTATATTTGGAAACTGCTTTG AATATTCTTGATGGCAACAAATGTAGCAAGAAATGTCATTTAACCAGATATTAAGTAGGA AATTATCAGTCAGTAAACTCTTATAGTAGCAGTACCTTTCTTTAAAAAGCAGAGAGGGAG TTCCCATTGTGGCGCAGGGGTTAACGAATCTGAGTAGGAACCATGAGG |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 21 entry(ies) | More info |
Aligned organism(s): 21 entry(ies) | Help | Less info |
1-144, gnl|bosTau2|chr10 (29067123-29066980) | |
1-144, gnl|canFam2|chr8 (30051960-30052197) | |
1-144, gnl|danRer3|chr13 (39365544-39365771) | |
1-144, gnl|dasNov1|scaffold_159431 (3679-3915) | |
1-144, gnl|echTel1|scaffold_316072 (19987-20224) | |
1-144, gnl|fr1|chrUn (2713590-2713360) | |
1-144, gnl|hg17|chr14 (50181193-50181430) | |
1-144, gnl|Hg17|chr14 (50181355-50181212) | |
1-144, gnl|loxAfr1|scaffold_3115 (47094-46857) | |
1-144, gnl|mm7|chr12 (67916941-67917178) | |
1-144, gnl|Mm7|chr12 (67917103-67916960) | |
1-144, gnl|monDom2|scaffold_73 (6761491-6761736) | |
1-144, gnl|oryCun1|scaffold_141150 (18814-18577) | |
1-144, gnl|panTro1|chr15 (49596162-49596399) | |
1-144, gnl|rheMac2|chr7 (113704449-113704686) | |
1-144, gnl|rn3|chr6 (92094989-92095226) | |
1-144, gnl|tetNig1|chr10 (11279063-11278842) | |
1-144, gnl|xenTro1|scaffold_666 (519730-519483) | |
289-840, gnl|bosTau2|chr10 (29051641-29051098) | |
289-840, gnl|Hg17|chr14 (50171852-50171296) | |
289-840, gnl|Mm7|chr12 (67907339-67906786) |
Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
1-144, gnl|bosTau2|chr10 (29067123-29066980) | |
1-144, gnl|canFam2|chr8 (30051960-30052197) | |
1-144, gnl|danRer3|chr13 (39365544-39365771) | |
1-144, gnl|dasNov1|scaffold_159431 (3679-3915) | |
1-144, gnl|echTel1|scaffold_316072 (19987-20224) | |
1-144, gnl|fr1|chrUn (2713590-2713360) | |
1-144, gnl|hg17|chr14 (50181193-50181430) | |
1-144, gnl|Hg17|chr14 (50181355-50181212) | |
1-144, gnl|loxAfr1|scaffold_3115 (47094-46857) | |
1-144, gnl|mm7|chr12 (67916941-67917178) | |
1-144, gnl|Mm7|chr12 (67917103-67916960) | |
1-144, gnl|monDom2|scaffold_73 (6761491-6761736) | |
1-144, gnl|oryCun1|scaffold_141150 (18814-18577) | |
1-144, gnl|panTro1|chr15 (49596162-49596399) | |
1-144, gnl|rheMac2|chr7 (113704449-113704686) | |
1-144, gnl|rn3|chr6 (92094989-92095226) | |
1-144, gnl|tetNig1|chr10 (11279063-11278842) | |
1-144, gnl|xenTro1|scaffold_666 (519730-519483) | |
289-840, gnl|bosTau2|chr10 (29051641-29051098) | |
289-840, gnl|Hg17|chr14 (50171852-50171296) | |
289-840, gnl|Mm7|chr12 (67907339-67906786) |
Expressed library(ies): 8 entry(ies) | More info |
Expressed library(ies): 8 entry(ies) | Help | Less info |
tes (0.415628) | |
sme (0.305437) | |
ton (0.1755) | |
mcp (0.170648) | |
cst (0.140036) | |
ssp (0.13552) | |
sug (0.127291) | |
ldo (0.0970026) |
Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
tes (0.415628) | |
sme (0.305437) | |
ton (0.1755) | |
mcp (0.170648) | |
cst (0.140036) | |
ssp (0.13552) | |
sug (0.127291) | |
ldo (0.0970026) |