Non-Coding RNA Search

Ss1.1-rsme015_e14.5

Sequence:


               
               CAATGCAAATCTAAGTTATCATGGTCAATCTCAGTTTAAAAAATGAGGAGAGCCTTCCAA
CCTTCACTGGATTATGGAAATATGAAAGTTATAGTATGTTTGCTAAATAGCAAATCACAC
TACCTATCAATATAACTATAATGTAAACATAAGAAGATATCAACCAAATTCTGCTATGTT
ATGAATCATCGGGTTATAAAGTGGCTGAGCAAGCAGAGAGAGAAGGAGACCTTCATTTGA
AAATTCCAATATAAAAGTCACAGTAAGGAATTAAGGAAACTACATAAACATATCTGAACA
GAAAAGATCTAGACATCAGGATGGCATACCTTTTCAATTTGTTTTTGTTTGCTGAGTTCT
TTCTGTTGCTTCTCTTTGACCCTCTCCATTTCTTTTGGTATTTCTGATGCCCTACGATCC
TGAAGTACAGATGAATACAACTAATGAATTAAATATGAAAAATAACTTTACATTTTCAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATGCAAATCTAAGTTATCATGGTCAATCTCAGTTTAAAAAATGAGGAGAGCCTTCCAA
CCTTCACTGGATTATGGAAATATGAAAGTTATAGTATGTTTGCTAAATAGCAAATCACAC
TACCTATCAATATAACTATAATGTAAACATAAGAAGATATCAACCAAATTCTGCTATGTT
ATGAATCATCGGGTTATAAAGTGGCTGAGCAAGCAGAGAGAGAAGGAGACCTTCATTTGA
AAATTCCAATATAAAAGTCACAGTAAGGAATTAAGGAAACTACATAAACATATCTGAACA
GAAAAGATCTAGACATCAGGATGGCATACCTTTTCAATTTGTTTTTGTTTGCTGAGTTCT
TTCTGTTGCTTCTCTTTGACCCTCTCCATTTCTTTTGGTATTTCTGATGCCCTACGATCC
TGAAGTACAGATGAATACAACTAATGAATTAAATATGAAAAATAACTTTACATTTTCAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               151-475, gnl|bosTau2|chr22 (33171696-33171372)
               

               
               151-475, gnl|Hg17|chr3 (57277719-57277398)
               

               
               151-475, gnl|Mm7|chr14 (24358059-24358346)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               151-475, gnl|bosTau2|chr22 (33171696-33171372)
               

               
               151-475, gnl|Hg17|chr3 (57277719-57277398)
               

               
               151-475, gnl|Mm7|chr14 (24358059-24358346)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sme (0.610874)
               

               
               sag (0.182715)
               

               
               ldo (0.0970026)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.610874)
               

               
               sag (0.182715)
               

               
               ldo (0.0970026)

	151-475, gnl\|bosTau2\|chr22 (33171696-33171372)
	151-475, gnl\|Hg17\|chr3 (57277719-57277398)
	151-475, gnl\|Mm7\|chr14 (24358059-24358346)