Ss1.1-rsme040_n21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGGGAGGCCAGACTGGTCTTGAAACCCATGCCCTCAAGGATGCTGGAACAATCTTTGGA AATCGCACAACTCTGATGGTGCCCTTCAGTGGCTCCACACTACCTTCAGGCTAAAGTCAA AACTCAACAGAGCAGGGAATTTCTTGGTGCCTCAGTGGGTTAAGGATCTGGCACTGTCAT TGCCATGGCTCGAGTTCAATCCCTGGCCCAGGAACTTCTTCAGGGCATGCTCCCCGCCCA AAAAAATTGGGGAAAAAAAACTTG------------------------------------ ------------------------------------------------------------ CCAGCGTTACCTCGAGCTGTGCCGTAGCTCACAGACGCAGCTCGGATCCCGCGTTGCTGT GGCTCTGGCATAGGCTGGTGGCTACAGCTCCGATTCAGCCCCTAGCCTGGGAACTTCTAT ATGCCCCAGGTGAAAAGACAAAAAGACAAAAAAAAAAAAAAAAAACTCGACCTCGTGCCG AATTCGGCACGAGGCTGCTGGGGATGAAGCTGTTTCTGAACGAGTTTGTGGCATATCAGG AGCTCTCCGGGTACAAGCAGCGCCGCCTCGCAGGGGCTGAGGAGTGGGTCGGCTCCAGGA AGCAGTGGATCTCTGTCAGAGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGGGAGGCCAGACTGGTCTTGAAACCCATGCCCTCAAGGATGCTGGAACAATCTTTGGA AATCGCACAACTCTGATGGTGCCCTTCAGTGGCTCCACACTACCTTCAGGCTAAAGTCAA AACTCAACAGAGCAGGGAATTTCTTGGTGCCTCAGTGGGTTAAGGATCTGGCACTGTCAT TGCCATGGCTCGAGTTCAATCCCTGGCCCAGGAACTTCTTCAGGGCATGCTCCCCGCCCA AAAAAATTGGGGAAAAAAAACTTG------------------------------------ ------------------------------------------------------------ CCAGCGTTACCTCGAGCTGTGCCGTAGCTCACAGACGCAGCTCGGATCCCGCGTTGCTGT GGCTCTGGCATAGGCTGGTGGCTACAGCTCCGATTCAGCCCCTAGCCTGGGAACTTCTAT ATGCCCCAGGTGAAAAGACAAAAAGACAAAAAAAAAAAAAAAAAACTCGACCTCGTGCCG AATTCGGCACGAGGCTGCTGGGGATGAAGCTGTTTCTGAACGAGTTTGTGGCATATCAGG AGCTCTCCGGGTACAAGCAGCGCCGCCTCGCAGGGGCTGAGGAGTGGGTCGGCTCCAGGA AGCAGTGGATCTCTGTCAGAGCAG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 12-135, gnl|bosTau2|chr19 (38116904-38116780) | |
| 12-135, gnl|Hg17|chr17 (39612014-39612125) | |
| 458-583, gnl|bosTau2|chr21 (12949862-12949987) | |
| 458-583, gnl|canFam2|chr3 (57034499-57034710) | |
| 458-583, gnl|danRer3|chrUn (51993775-51993984) | |
| 458-583, gnl|dasNov1|scaffold_66094 (8296-8508) | |
| 458-583, gnl|echTel1|scaffold_81327 (770-982) | |
| 458-583, gnl|fr1|chrUn (200553804-200554014) | |
| 458-583, gnl|galGal2|chr10 (1774000-1773789) | |
| 458-583, gnl|hg17|chr15 (83279550-83279762) | |
| 458-583, gnl|Hg17|chr15 (83279633-83279758) | |
| 458-583, gnl|loxAfr1|scaffold_6778 (11268-11058) | |
| 458-583, gnl|mm7|chr7 (77035963-77036175) | |
| 458-583, gnl|Mm7|chr7 (77036046-77036171) | |
| 458-583, gnl|monDom2|scaffold_45 (903160-903371) | |
| 458-583, gnl|oryCun1|scaffold_172008 (24310-24522) | |
| 458-583, gnl|panTro1|chr16 (84085098-84085310) | |
| 458-583, gnl|rheMac2|chr7 (64350921-64350710) | |
| 458-583, gnl|rn3|chr1 (137440501-137440713) | |
| 458-583, gnl|tetNig1|chr13 (2201086-2201296) | |
| 458-583, gnl|xenTro1|scaffold_62 (1789106-1789312) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-135, gnl|bosTau2|chr19 (38116904-38116780) | |
| 12-135, gnl|Hg17|chr17 (39612014-39612125) | |
| 458-583, gnl|bosTau2|chr21 (12949862-12949987) | |
| 458-583, gnl|canFam2|chr3 (57034499-57034710) | |
| 458-583, gnl|danRer3|chrUn (51993775-51993984) | |
| 458-583, gnl|dasNov1|scaffold_66094 (8296-8508) | |
| 458-583, gnl|echTel1|scaffold_81327 (770-982) | |
| 458-583, gnl|fr1|chrUn (200553804-200554014) | |
| 458-583, gnl|galGal2|chr10 (1774000-1773789) | |
| 458-583, gnl|hg17|chr15 (83279550-83279762) | |
| 458-583, gnl|Hg17|chr15 (83279633-83279758) | |
| 458-583, gnl|loxAfr1|scaffold_6778 (11268-11058) | |
| 458-583, gnl|mm7|chr7 (77035963-77036175) | |
| 458-583, gnl|Mm7|chr7 (77036046-77036171) | |
| 458-583, gnl|monDom2|scaffold_45 (903160-903371) | |
| 458-583, gnl|oryCun1|scaffold_172008 (24310-24522) | |
| 458-583, gnl|panTro1|chr16 (84085098-84085310) | |
| 458-583, gnl|rheMac2|chr7 (64350921-64350710) | |
| 458-583, gnl|rn3|chr1 (137440501-137440713) | |
| 458-583, gnl|tetNig1|chr13 (2201086-2201296) | |
| 458-583, gnl|xenTro1|scaffold_62 (1789106-1789312) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) | |
| nje (0.16592) |