Non-Coding RNA Search

Ss1.1-rsme21_l12.5

Sequence:


               
               GTTTCTCAAAATCTTCTCTTAGTGCAAGGCAGTGAGGGCTGTACATTTTGTTCTTTTTGC
GTCTTTACACCTTGTAATCCTTTTAGAAGAATGACGCGTCTGTTTGAACTAACTGCATAC
TCTAGTCCAGTATAGCACGTCCTAAAGCTACCTCCAACTCAGCCTGACTTCTGAGGAAAG
GCTACGCATAGCCTTGTTTGATAAAAACATGGACGTGACTAAAGAATCAAGATAGAGGAC
AAGAGTAAGAACTCCTTGCTGTAGAAACCTTACCCTAACATAGGAGCAACTGAAGTGAAG
TGTTCAAAGCTTGTCTTGCATGATTAGTTTTGGCTGGTAGTTTTGTTTTGTTTTGGTTAT
TTTTACCAGAGCCACTTTTCTGTTTTGGTTTACTTTCTCTGGGAAATAATGGGAGGGAGG
GGGATAAAACATTCAGCTTAAAACTTGAAGTGCTTTTTCAAATCAGTATTGGAATCTGTT
TGATTTGTTTTAATATTTTCAAGTCTAATCACAGACGAAACAGAACTTTCGAAAATGAGC
TCAAAAAATGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTCTCAAAATCTTCTCTTAGTGCAAGGCAGTGAGGGCTGTACATTTTGTTCTTTTTGC
GTCTTTACACCTTGTAATCCTTTTAGAAGAATGACGCGTCTGTTTGAACTAACTGCATAC
TCTAGTCCAGTATAGCACGTCCTAAAGCTACCTCCAACTCAGCCTGACTTCTGAGGAAAG
GCTACGCATAGCCTTGTTTGATAAAAACATGGACGTGACTAAAGAATCAAGATAGAGGAC
AAGAGTAAGAACTCCTTGCTGTAGAAACCTTACCCTAACATAGGAGCAACTGAAGTGAAG
TGTTCAAAGCTTGTCTTGCATGATTAGTTTTGGCTGGTAGTTTTGTTTTGTTTTGGTTAT
TTTTACCAGAGCCACTTTTCTGTTTTGGTTTACTTTCTCTGGGAAATAATGGGAGGGAGG
GGGATAAAACATTCAGCTTAAAACTTGAAGTGCTTTTTCAAATCAGTATTGGAATCTGTT
TGATTTGTTTTAATATTTTCAAGTCTAATCACAGACGAAACAGAACTTTCGAAAATGAGC
TCAAAAAATGGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-464, gnl|bosTau2|chr14 (38385733-38385276)
               

               
               1-464, gnl|Hg17|chr8 (101603896-101603470)
               

               
               1-464, gnl|Mm7|chr15 (36588547-36588123)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-464, gnl|bosTau2|chr14 (38385733-38385276)
               

               
               1-464, gnl|Hg17|chr8 (101603896-101603470)
               

               
               1-464, gnl|Mm7|chr15 (36588547-36588123)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sme (0.610874)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.610874)
               

               
               pgl (0.118483)

	1-464, gnl\|bosTau2\|chr14 (38385733-38385276)
	1-464, gnl\|Hg17\|chr8 (101603896-101603470)
	1-464, gnl\|Mm7\|chr15 (36588547-36588123)