Non-Coding RNA Search

Ss1.1-rsme22_b18.5

Sequence:


               
               AATGTGAATTTTCTAATGTCCAAGATGATGATCAAAATTTATATCTGTTAATTATCAGAA
CTATCTTAGAGGAAATTTTTTTAAATGATTTGGTCAAATAAGCCAGGACCACATTTTCAT
GCTAAACAACTTTTTCATGGCAATGGAAACCCAATTCTAATTATATAATCTTTGCATGTG
ACTAAAATTGTCCATGGGGTACTCTGCATTTTAACTGATCGGTTTCTTCACCAATTCATG
GCACTGAAAAAAAGAAACAAAGATGTATAATTTGGACCAGATGTTTCTAAATTGCTCCTA
TTTCCAATAGTCATCAAATATGCCACAGCTAAACATAACTCCGCAGCCTCTCTCCATTGT
TACTACACTACAGGTCAAAGAGTATAGACTCTGGTTTCAAACTGATGGCTAAACTCTCTC
TGCATGAAAGGAAGAGCAATAACAACTCTTCTGCATAGTGATTATTAAAATATTTTTGTA
GAAGTAGATCATCCTCAAGGGGAGATGTGAATGATCAAGATGCAATCCAGGAGAAGTTTT
ATCCGCCTCGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGTGAATTTTCTAATGTCCAAGATGATGATCAAAATTTATATCTGTTAATTATCAGAA
CTATCTTAGAGGAAATTTTTTTAAATGATTTGGTCAAATAAGCCAGGACCACATTTTCAT
GCTAAACAACTTTTTCATGGCAATGGAAACCCAATTCTAATTATATAATCTTTGCATGTG
ACTAAAATTGTCCATGGGGTACTCTGCATTTTAACTGATCGGTTTCTTCACCAATTCATG
GCACTGAAAAAAAGAAACAAAGATGTATAATTTGGACCAGATGTTTCTAAATTGCTCCTA
TTTCCAATAGTCATCAAATATGCCACAGCTAAACATAACTCCGCAGCCTCTCTCCATTGT
TACTACACTACAGGTCAAAGAGTATAGACTCTGGTTTCAAACTGATGGCTAAACTCTCTC
TGCATGAAAGGAAGAGCAATAACAACTCTTCTGCATAGTGATTATTAAAATATTTTTGTA
GAAGTAGATCATCCTCAAGGGGAGATGTGAATGATCAAGATGCAATCCAGGAGAAGTTTT
ATCCGCCTCGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-550, gnl|bosTau2|chr7 (34464839-34465374)
               

               
               1-550, gnl|Hg17|chr5 (137244567-137245629)
               

               
               1-550, gnl|Mm7|chr18 (44722092-44722568)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-550, gnl|bosTau2|chr7 (34464839-34465374)
               

               
               1-550, gnl|Hg17|chr5 (137244567-137245629)
               

               
               1-550, gnl|Mm7|chr18 (44722092-44722568)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sme (0.305437)
               

               
               tbr (0.154178)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               tbr (0.154178)

	1-550, gnl\|bosTau2\|chr7 (34464839-34465374)
	1-550, gnl\|Hg17\|chr5 (137244567-137245629)
	1-550, gnl\|Mm7\|chr18 (44722092-44722568)