Non-Coding RNA Search

Ss1.1-rsme22_l12.5

Sequence:


               
               TGTGGTTAAGGAGACCTGGCCAGCACACACCATCACACAGTCCCAGATACCCCTTCTCCT
TACCCCCTGGTAAGTTGAGGCTATGTGTTAACTCACCTCAGTCCTAGAGAAGGATTGTAC
TACTGCCAAGCCGCCTAAGATCCTAAATTGTGCCATCTGGAAAGTAAGAAACCCCCCAAA
TGTAACATCTGTCTTTAGTCACCTTTAGACCATCCCCCTTGAAAACCACCCTGCTAAAAT
AACTTAGCGGCAAGAACTGAAGGGATGAAGTCACTTGCTAAAGAGAAGAAAACCTAGGAA
AGCTAGGCCTAGTTCCAGTAAACTCTGTCATTCTCCTTAAATAAAAATACGAGGAAAAGG
AAAGTAGAATTCTTAAAGATGATTGAAAGCCAGCCAGTCCAGATATCAATAGTCCATGAC
CCAGGTGCTTAAATAACCACCACCCCTTCCCCTTCCCATTTAGAATAAAGACAGAAAGGT
GAGGGAAGAATGATCATGTATTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGGTTAAGGAGACCTGGCCAGCACACACCATCACACAGTCCCAGATACCCCTTCTCCT
TACCCCCTGGTAAGTTGAGGCTATGTGTTAACTCACCTCAGTCCTAGAGAAGGATTGTAC
TACTGCCAAGCCGCCTAAGATCCTAAATTGTGCCATCTGGAAAGTAAGAAACCCCCCAAA
TGTAACATCTGTCTTTAGTCACCTTTAGACCATCCCCCTTGAAAACCACCCTGCTAAAAT
AACTTAGCGGCAAGAACTGAAGGGATGAAGTCACTTGCTAAAGAGAAGAAAACCTAGGAA
AGCTAGGCCTAGTTCCAGTAAACTCTGTCATTCTCCTTAAATAAAAATACGAGGAAAAGG
AAAGTAGAATTCTTAAAGATGATTGAAAGCCAGCCAGTCCAGATATCAATAGTCCATGAC
CCAGGTGCTTAAATAACCACCACCCCTTCCCCTTCCCATTTAGAATAAAGACAGAAAGGT
GAGGGAAGAATGATCATGTATTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-504, gnl|bosTau2|chr1 (39085023-39084575)
               

               
               23-504, gnl|Hg17|chr3 (124082332-124083101)
               

               
               23-504, gnl|Mm7|chr16 (35370773-35370369)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-504, gnl|bosTau2|chr1 (39085023-39084575)
               

               
               23-504, gnl|Hg17|chr3 (124082332-124083101)
               

               
               23-504, gnl|Mm7|chr16 (35370773-35370369)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sme (0.305437)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               cty (0.10408)

	23-504, gnl\|bosTau2\|chr1 (39085023-39084575)
	23-504, gnl\|Hg17\|chr3 (124082332-124083101)
	23-504, gnl\|Mm7\|chr16 (35370773-35370369)