Non-Coding RNA Search

Ss1.1-rsme37_k19.5

Sequence:


               
               CCCGAGGCCCCGAAAGCGGCCGATCGGATCACTCACGCAGAAAAACTGTCCCCTCTGGGA
GGTCAGGCTTGCAGATACTGTGACCACACAGAGCTCCATGACTGCCCTGGGAGTTCATCG
CCGCCTTTTCCCAGACAGGCTTCCCGTGCTGGTGGTAAAGCAGTTTCTGATTCACAATTG
AGCAGCCTCTATGAGAAGTCGAGAGTTTTTCATCTCGATGTCCCTCAAATTCACGTGGCC
CTTGACAAGAAGACCGTGCTCGCCGAGAAGATAGTCGCCGAAGCCATTGAAAAGGCCGAG
AGAGAGCTGAGAGGTACCAGCCTGGTGGCGGATAGTGGCATCGGACAGGATGGCGTCAGC
TTTGCCGAAAGCCTCACCACGGAGATCATGGCATCTGCCATGGTCAGTGCTGGACATGCC
GTGAGCAGTCCAAAAGAAATAGAAGACTTGCAATCAGCGGAGTCCTTTGGTAGCCAGCAG
ATGAACCTCAGTATTGGTGATGACAGCACGGGAAGCTGGTCCAATTTAAGTTTTGAGGAT
GAACACCAGGATGAAAGCAGCAGTTTCCATCATCTAAGTGAAAGTGATGGGCCAGATGAT
AAAGATGAAGAGCGACGATGATGCAGAAGATTTGGAGCAGGATGGAAAGACTCTGCTAAT
CTCGAATATTGACATGGAGCCCTGCACAGTGGACCCCCAGCTGAGGGTTATTCTTCAGTG
GCTTGTTGCCTCCGAGGCAGAAGTTGCAGAGCTTTATTTTCACGACTCTTCGAAGAAGGA
GTTTATACGACTTTCAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGAGGCCCCGAAAGCGGCCGATCGGATCACTCACGCAGAAAAACTGTCCCCTCTGGGA
GGTCAGGCTTGCAGATACTGTGACCACACAGAGCTCCATGACTGCCCTGGGAGTTCATCG
CCGCCTTTTCCCAGACAGGCTTCCCGTGCTGGTGGTAAAGCAGTTTCTGATTCACAATTG
AGCAGCCTCTATGAGAAGTCGAGAGTTTTTCATCTCGATGTCCCTCAAATTCACGTGGCC
CTTGACAAGAAGACCGTGCTCGCCGAGAAGATAGTCGCCGAAGCCATTGAAAAGGCCGAG
AGAGAGCTGAGAGGTACCAGCCTGGTGGCGGATAGTGGCATCGGACAGGATGGCGTCAGC
TTTGCCGAAAGCCTCACCACGGAGATCATGGCATCTGCCATGGTCAGTGCTGGACATGCC
GTGAGCAGTCCAAAAGAAATAGAAGACTTGCAATCAGCGGAGTCCTTTGGTAGCCAGCAG
ATGAACCTCAGTATTGGTGATGACAGCACGGGAAGCTGGTCCAATTTAAGTTTTGAGGAT
GAACACCAGGATGAAAGCAGCAGTTTCCATCATCTAAGTGAAAGTGATGGGCCAGATGAT
AAAGATGAAGAGCGACGATGATGCAGAAGATTTGGAGCAGGATGGAAAGACTCTGCTAAT
CTCGAATATTGACATGGAGCCCTGCACAGTGGACCCCCAGCTGAGGGTTATTCTTCAGTG
GCTTGTTGCCTCCGAGGCAGAAGTTGCAGAGCTTTATTTTCACGACTCTTCGAAGAAGGA
GTTTATACGACTTTCAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               4-428, gnl|bosTau2|chr12 (3814683-3815107)
               

               
               4-428, gnl|Hg17|chr13 (41775575-41775999)
               

               
               4-428, gnl|Mm7|chr14 (73190993-73190569)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-428, gnl|bosTau2|chr12 (3814683-3815107)
               

               
               4-428, gnl|Hg17|chr13 (41775575-41775999)
               

               
               4-428, gnl|Mm7|chr14 (73190993-73190569)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               sme (0.305437)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)

	4-428, gnl\|bosTau2\|chr12 (3814683-3815107)
	4-428, gnl\|Hg17\|chr13 (41775575-41775999)
	4-428, gnl\|Mm7\|chr14 (73190993-73190569)